Yersinia frederiksenii: AW19_4003
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Entry
AW19_4003 CDS
T03606
Symbol
rsmH
Name
(GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yfr03009
]
AW19_4003 (rsmH)
Enzymes [BR:
yfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
AW19_4003 (rsmH)
Ribosome biogenesis [BR:
yfr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AW19_4003 (rsmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_31
Methyltransf_25
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
AJI85487
LinkDB
All DBs
Position
4343618..4344580
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AA seq
320 aa
AA seq
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MVDNNKTVDNNYKHTSVLLDEAVNGLNIRDNGIYIDGTFGRGGHSRLILSQLGPEGRLIA
IDRDPQAIEAAKSITDPRFSIVHGPFSDLAHYVRELDLVGRIDGVLLDLGVSSPQLDDPE
RGFSFMRDGPLDMRMDPTRGLSAADWLMKAGADDIAWVLKTFGEERFAKRLAKAIVERNL
TQPMTRTKELADLIANASPFREKHKHPATRSFQAIRIYINSELEEIERALDGALEVLAPE
GRLSVISFHSLEDRIVKNFIRHHSRGPQVPAGLPLTEAQLRSMGGRTLKSAGKMMPPDAE
VAENPRARSSVLRFAERIKE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtagataacaacaaaactgtagataacaactacaagcatacaagcgtattactggat
gaggcggtgaatggcctgaacatccgtgataacggcatctatattgacggaacttttggc
cgtggtggccactcgcgcctgattttgtcccaacttgggccagaagggcgtctgatagca
attgatcgtgacccacaagctattgaagcggcaaaatcgattaccgacccccgtttttct
atcgtgcacggcccgttttctgatttggcccattatgtgcgggaattggatttagtcggc
cgtatcgacggtgtattgctggacttgggcgtttcttccccccaattagatgatccagag
cgcggtttctctttcatgcgtgacgggccgttagacatgcggatggacccaactcgtggg
ttatcagcggctgactggttgatgaaagccggtgctgacgatattgcttgggtgttgaaa
acctttggtgaagagcgttttgccaagcgcttagccaaggccattgttgagcgtaacctc
acgcagccaatgactcgcaccaaagagctggctgatttgatcgctaatgccagcccattc
cgcgaaaagcataagcatccagcaacccgcagcttccaagctatccgtatctatatcaac
agtgaattggaagagatagagcgcgcattggatggggcgcttgaagtgctagcacctgaa
ggccgcttgtccgtcattagcttccattctctggaagaccgtattgtgaaaaactttatc
cgtcatcacagccgtgggccacaagtgccggcgggactgccattgacggaagcacagttg
cgcagcatgggtgggcgcaccttgaaatccgctggcaaaatgatgcctccggatgccgaa
gtggctgaaaacccacgggcgcgcagctcggtattacgttttgccgagaggattaaagag
tga
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