Yinghuangia sp. ASG 101: LO772_28365
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Entry
LO772_28365 CDS
T07749
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
yia
Yinghuangia sp. ASG 101
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
HTH_23
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
UGQ10706
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Position
complement(6604553..6606385)
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AA seq
610 aa
AA seq
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MPPEDDPSASGSDGQSPDRPADPQGGSAGSGESAWIPGQERAGEPPAAVLPGQRTAHHRR
SPFPGPRADEPGADRPAGAEPPGAGAPDTAAPGAVAAPLRPDGDAPEHASAAPADDGPSD
AYLADRVREGDDAAYEVLYQRHVDAVRRLARLCTRTRENADDLVAETFTRTLRALRSGHG
PREACRPYLLTTTRHVAGDWTRNERRVLLTDDVASYEPRPGGEPDDPAVAADDRRMAAQA
FKELPERWQAVLWYTEVEREPRERVAPRLGVSPNALSKLKERARDGLRDAYLKVYVENGL
AEECRPYAEHYGAYVRQRLGVRAEENVRTHLDGCDRCRAACLELAGVSTHMRVVAEGLLG
AVALTYIGAASATTAVGVLAGGATGAAGSGAGSSGSGSSGGGGAQGAAGKSRTAVRASAV
AGVLVVALAALAWAFMAQQPQKDGEPAPPPAAAPAPAPPPPPAPEPPPPPPPAAPPPPPA
PTPPPPPPPKPAPPTPTPPKPTPTPPKPSPSPPATTKPRTPPPTTRAPRPPKPSTRPTII
VEPTRVVVDNGQARVECTGKQAGNSGRPRCDQVKITVPNSAAGPNGRGVPLPACDAPGHL
KNSRVTICRG
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgccacccgaggacgacccgtcggcctccggctcggacggacaatcgccggaccggccc
gccgacccccagggcggctccgcgggcagcggcgagtccgcctggattcccggacaggaa
cgcgccggcgagccgccggccgccgtcctgcccggacaacgcaccgcgcaccatcgccgc
agccccttccccggcccgcgcgcggacgaacccggcgcggatcggccggccggggccgag
ccgcccggtgccggggcgcccgacaccgcagcgcccggtgccgtcgcggcccccctccgg
ccggacggcgacgcccccgaacacgcgtccgcggcaccggccgacgacggcccgtccgac
gcctatctcgccgaccgggtgcgcgagggcgacgacgccgcctacgaagtgctctaccag
cgccacgtcgacgcggtgcgccgcctcgcccgcctctgcacccggacccgcgagaacgcc
gacgacctcgtcgccgagaccttcacccgcacgctgcgcgcgctgcgctccgggcacggg
ccgcgcgaggcctgccgcccctacctgctcaccacgacccggcacgtggcgggcgactgg
acgcgcaacgagcggcgggtcctgctcaccgacgacgtcgcgtcctacgagccgcggccg
ggcggcgagccggacgaccccgcggtcgccgcggacgaccggcggatggccgcccaggcg
ttcaaggaactcccggagcgctggcaggccgtgctctggtacaccgaggtcgaacgcgag
ccccgcgagcgcgtcgcgccgcgcctgggggtcagccccaacgcgctgtcgaagctcaag
gaacgcgcgcgcgacggcctccgggacgcctatctgaaggtctacgtcgagaacgggctc
gcggaggagtgccgaccgtacgccgagcactacggcgcctacgtccggcagcgactcggc
gtccgggccgaggagaacgtccggacgcacctcgacggctgcgaccggtgccgggccgcg
tgcctcgaactggcgggcgtgagcacgcacatgcgcgtggtcgccgaaggcctgctcggt
gccgtggcactgacctacatcggtgcggcgagcgcgacgaccgcggtcggcgtgctcgcc
ggcggcgccacgggcgccgccgggtcgggtgcgggctcgtcgggctcgggctcgtcggga
gggggaggagcacagggagcggccggaaagagccgtaccgcggtcagggcgtcggcggtc
gccggcgtcctggtcgtggccctcgcggccctcgcgtgggctttcatggcccagcagccc
cagaaggacggggaacccgcgccgccgcccgccgcggcccccgccccggctccgccgcct
cccccggctcccgaaccgcccccgccgcctccgcccgccgctcctccgccgcccccggcg
ccgaccccgcctccgcctccgcctccgaagcccgcccctccgacgccgacgccgccgaag
ccgacgcccacgccgcccaagccgtccccatcaccgcccgccaccacgaagcccaggacg
ccgccgcccaccacgcgggcgccgcggccccccaagccctccacccggccgacgatcatc
gtcgagccgacgcgcgtcgtcgtcgacaacggccaggcgcgcgtggagtgcacgggcaag
caagccggcaactcgggaaggccgcgctgcgaccaggtcaagatcaccgtgccgaacagc
gccgcgggcccgaacggacgaggcgtcccgctccccgcctgcgacgccccgggacacctc
aagaactccagagtgaccatctgccgcggttga
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