Yinghuangia sp. ASG 101: LO772_28540
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Entry
LO772_28540 CDS
T07749
Symbol
cobT
Name
(GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
KO
K00768
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:
2.4.2.21
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia00860
Porphyrin metabolism
yia01100
Metabolic pathways
yia01240
Biosynthesis of cofactors
Module
yia_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LO772_28540 (cobT)
Enzymes [BR:
yia01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.21 nicotinate-nucleotide---dimethylbenzimidazole phosphoribosyltransferase
LO772_28540 (cobT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBI_PRT
Nitroreductase
Motif
Other DBs
NCBI-ProteinID:
UGQ10738
LinkDB
All DBs
Position
6649647..6656567
Genome browser
AA seq
2306 aa
AA seq
DB search
MNEHDELRPPHNAGVAPGHPGATAPAYGYPDVDGSGRLDDLDDLDDDDALLMPGPQGGWA
EVPTESGHFRAVQMPAGPVAGEVPAPGYAVGTPADGLGYVPPVGQTGPVGQAGQVGQVGQ
VGQVGQQHGQHPHPDAQTPRAHPGHLPQYPQDQQLHHQAHPQQPTHLVQEMPHAHDGMPQ
PHHQGAPGHAAPPVPPESAYGVPPQGGHPEAVVPADAQRPASPADYPDQAGVPGFGAPVD
PASPGAPQMGPTPVPPTQAPPGFAVPHNAGDSAQHGVHPPQTFPGGAPEAAGQPPQAYAP
HPGVAAPAAPLQDTTQPTSGPVRSLADRMSAAAAAPVPPAGLGPAASGPQLGMPAPEFAP
GQQVPQHVPPHPQSSGAHRGPETGPDAASPVGQPSPAAGFAVHGQQAPDSGAAPAFAPPA
VDGGPMPESGVRPSAETQQPHHPAQPGGMAEPSTERSGSIATAPRQPVAETAPGGQQPAP
GSEAPATPVQFPHQPNGSPQSQQIQAMTGAPGTTPPPRTTLPPRRQRRVGRGPASAQHQA
VRPAPNANPAPPVVPGQPGEANAARANAASADTAPSPATPQAATQPGAETPASAGQTGDV
NAAHANTPTAAAASAAPPVAEAPGQAPAAQPHAEPSADAAPAPVPPHDTARPVADAPVAT
GQPPAAPVNEPSVDAASAPAAPQAAAQPVVEVPGQAGPVSAAHANAQAVEASSAPVPPRS
DTRPGAEAQAAPEQSGAVNTAQSGTEQATASSEAAASTRQPQGQQPQGSASAPAPAGTLR
NPQAASGPQAPQAPQAPQPPNPAAPGVQAPADTQAPAPETGPAPADMPRIPPPPNGPVAT
GEAAQGAVHEAAPEPAPAPAPAQPRRMRTAAFADPETAPRRSVRTRNLRARAANPETPPE
APAGAAPSEVPPAAQPAAEPGSSGAADAGARPRTPGARPRTRVRAVAGDPVPVPAEAPAA
PPATAPVPDSAADAATQAAETPNAAASAPAAPTGEPVSGAESPAVPQPGGETPAPTGGQE
PGAPSPAPSAPAPASPNSSAENVSSTAVPDNAPTAPAPAGETRPVSGDTAAAPRQGPARS
ASGPGRVAARRARQARVAPAPAPAPAPAPAAESAPTPRQPAPEPREAQPPAVPVAGTPAA
GAQVTPAHQGPIPVPPIAPAPGSGAANAAAAAPTPGDDSAPGTPGKENATEPPANPAASH
GTPESGPQPSASTDAPASPETPAPTDEAAPAAQPVPAERSPQAPAAAPPAAPGDRATPTE
QVPHEGQAVQAVQPAQAVPADADADAAVADAQTVPAQAAQAAPEGEPAQAAGRQVPAARR
RGPRPAPVGVAAQAQPAQAQAEQPAPAEPAPRSAQDEQSAQAAASADASAGPSGRRRGPR
TATVPAQGAPADAAAPGQSAPEQAVDASEAPTQPLPVPPAAQPRADSASAGPAAESSGVD
GPDVPSSAPAAGPTADAAAAAPAAAHDAAADQPDTPRSAPSDAAGPSAAPQPGAAGQPAE
QARTADESAANTQPAAADSAEHAPGTPDGDDSAGETGADQAGRPEHPEQPEQTADGTTPD
TGTAAPQPAPANAAPAATDPAAAAPARGDATAEPSDAREEPAGGAAPQAAPEAAGSADDA
APAAAESPAGSPEAEAGELPEGGRDGQGAQNGQDSQAAAGGAQGVRDGRGGDGPSPGTAD
AQEGPADARSADEAQAAAEAAGEDNADEATGDPARAAEAEPEPGEDPADPAPGYDDAARE
AVHRVMRERRDVRTGFRSDPVPDEVLIRVLQAAHHAPSVGYSQPWDFVVIRSEETRANVH
ALAARQREAYAASLPKARAKQFLGIKTEAILETPVNIVVTVDSTRGGRHTLGRQTQPQMG
PYSSALAVENLWLAARAEGLGVGWVSFFDERELRSELGLPEHLEIVAYLCVGFVDAFPGE
PELEQAGWAKQRPLSWVVHEEEYGRRGLPGEDPVRLLDETIRSVRPLDAKALSAAWDRHK
VMTKPAGSLGVLEMISAQLAGLARVCPPPVPEPAAVAVFAADHGVHAQGVSPWPQEVTAQ
MVHNFLGGGAVVNAFARQVGVEVCVVDVGVAAELPVASGLLPRKVRPGTGDMTEGPAMTR
EEVMRAIEVGVETARDLVTAGNRCLLTGDMGIANTTASAALIAVFTGSDVAEVTGRGTGI
DDHTHDHKVQVIRAALARHTPDPDDPVGVLAAVGGLEHAALAGFILGAAAMRTPVILDGV
IAGAAALVAHRIAPDALAACVAGHRSAEPGHAAALAKLGLRPLVELELRLGEGTGAVLAL
PLVQSAARVMHDVATFDSAGVSGKTG
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcacgacgaactgcgtccgccgcacaacgcgggcgtggcaccggggcacccc
ggcgccaccgcccccgcgtacggctaccccgacgtcgacggcagcggccgactcgacgac
ctggacgacctggacgacgacgacgccctgctcatgccgggcccgcagggcggctgggcg
gaagtccccacggaatcgggccacttccgggccgtgcagatgcccgcgggcccggtggcc
ggtgaggtgcccgcccccggctacgcggtcggcaccccggccgacgggctcgggtacgtg
cccccggtgggccagaccgggccggtcgggcaggcggggcaggtcgggcaggtggggcag
gtggggcaggtggggcagcagcacggtcaacacccgcaccccgacgcgcagacgccgcgg
gcccaccccggacacctgccgcagtacccgcaggaccagcagcttcaccaccaggcgcac
ccgcagcaaccaacgcacctggtgcaggagatgccgcacgctcacgacggcatgccgcag
ccgcatcaccagggcgcgcccggccacgccgcaccgcctgttccgccggagagcgcctac
ggagtgccgccccagggcggccaccccgaggcggtggtcccggccgacgcacagcggccc
gcgtcgccggccgactatcccgaccaggcgggcgtgcccggtttcggtgcccccgtggac
cccgcgtcgccgggtgccccccagatgggcccgaccccggtgccgccgacgcaggcgccc
ccgggcttcgccgtaccgcacaacgccggagactcggcgcagcacggcgtgcacccgccg
cagaccttccccggcggcgcacccgaggccgccgggcagccgccgcaggcgtatgcgccg
cacccgggggttgccgcgcccgcggctccgctccaggacaccacccagccgacgtcgggt
ccggtgcggtcgctcgccgaccggatgtcggccgcagccgccgccccggtcccgcccgcc
gggctcggacccgccgcgtccggaccccaactcggcatgcccgcaccggagttcgcaccg
ggtcagcaggtgccgcagcatgtcccgccgcacccgcagtcctccggcgcgcaccgggga
ccggagaccgggccggacgccgcgtcgccggtcgggcagccttcgccggcggccggtttc
gcggtccacgggcagcaggcgcccgactccggggcggcacccgctttcgcccctccggcc
gtcgacggcgggccgatgcccgagtccggcgtacgccccagcgcggaaacgcagcagccg
caccaccccgcgcagcccggcgggatggcggagccgtccaccgagcggtccgggagcatc
gccacggcaccgcgacagcccgtcgccgagaccgcgcccggcgggcagcagcccgcgccc
gggtccgaagccccggccacgcccgtgcagttcccgcaccagcccaacggctccccgcag
tcgcagcagatccaggcgatgacgggcgctcccgggacgaccccgccgccgcgcacgacg
ctgccgccgcgacggcagcgccgcgtcgggcgcgggcccgcatcggcccaacaccaggcc
gtccggccggccccgaatgcgaacccggcaccgccggtcgtgcccgggcagcccggcgag
gcgaacgccgcgcgggcgaacgcggcgtcggccgacaccgcaccgtccccggcgacgccg
caggccgccacgcagccgggggccgagacgcccgcctcggcggggcagaccggcgacgtg
aacgccgcgcacgcgaacacaccgacggccgcagccgcgtcggcggcaccgccggtggcc
gaggcaccggggcaggcacccgcagcgcagccccacgccgagccgtcggccgatgccgca
cccgctcccgttccgccgcacgacaccgcgcgaccggtcgcggacgctcccgtcgcgacg
gggcagccgcccgccgcgcccgtgaacgagccgtcggttgacgccgcgtcggctccggcg
gcgccgcaggccgccgcgcagccggtggtcgaggtgccgggtcaggcgggcccggtgtct
gccgcccacgcgaacgcccaggcggtcgaggcctcgtcggctccggtgccgccgcggagt
gacacgcgacccggtgcggaggcgcaggccgcgcccgagcaatccggcgcggtgaacacc
gcgcagtccggcaccgagcaggcgaccgcgtcgtcggaggccgccgcgtcgacgcggcag
ccgcagggacaacagccgcagggttcggcatccgctcccgcaccggcggggacactgcgg
aacccccaagcggcgagcgggccgcaggcaccgcaggcaccccaggcaccgcagccgccg
aatccggcggcgcccggcgtccaggcccccgccgacactcaggcccccgcgcccgagacc
ggtcccgcacccgccgacatgccgcgcatcccgccgcccccgaacggcccggtcgcgacc
ggggaggccgcacagggcgccgtccacgaggcggctcccgaaccggctccggccccggca
cccgcgcagccgcgccgtatgcgtacggccgcgttcgccgacccggagaccgcgccgcgc
cggagtgtgcgcacgcgcaacctgcgggcgcgcgcggcgaacccggagacgccgccggaa
gccccggccggcgcggcgccgtccgaggttccgccggccgcacagcccgccgccgagccc
ggctcgtcaggagcggcggacgcgggagcccggccgcgtacgcccggcgcgcgcccgcgc
acgcgggtgcgcgccgtggcgggcgacccggtgccggtgcccgcggaggcaccggctgcc
ccgcccgccaccgcacccgtccccgattcggcggcggatgcggccacccaggccgcggag
acgccgaacgcggcggcctcggcgcccgccgcgccgaccggtgagcccgtgtccggagcg
gagtccccggcggtcccgcaaccgggcggggaaacacccgcaccgaccgggggacaggaa
cccggggcaccgtccccggcaccctccgcccccgcacccgcctcgccgaactcctctgcg
gagaacgtgagttcgactgccgttccggacaacgcgccgaccgctcccgccccggccggg
gagacccggcccgtgtcgggggacaccgcggctgccccgcggcagggtcccgcacggtcc
gcctcggggccgggacgcgtcgccgcccggcgagcgcggcaggcccgcgtcgcccctgcc
cccgccccggcaccggctcccgcacccgcggccgaatcggcgccgacaccgcggcaaccg
gcgcccgagccccgcgaggcccagccgccagccgttccggtcgccgggacgcccgccgcc
ggtgcccaggtcactcccgcgcatcagggaccgatcccggtacccccgatcgccccggcg
ccgggatccggcgccgcgaacgccgctgccgcagcccccaccccgggcgacgacagcgcg
ccaggcacgcccggcaaggagaacgcaacggaaccccccgcgaaccccgcagcctcgcac
ggcaccccggaatccggcccgcagccgagtgcgtccaccgacgcgcccgcgagcccggag
acccccgcgccgacggacgaggcggccccggcggcacagcccgtcccggccgagcggtcg
ccacaggccccggcggctgcgccgcccgccgcaccgggcgaccgggcgaccccgaccgaa
caagtcccgcacgagggccaagccgtgcaggccgtgcagcctgcgcaggccgttcccgca
gacgcagacgcagacgctgccgtcgccgacgcgcagacggtgcccgcgcaggccgctcag
gcggcgcccgagggggaaccggcccaggccgccggtcggcaggtgccggccgcgcgtcgc
cgcggaccgcgtcccgcccccgtcggcgtggccgcccaggcccagcccgcacaggcgcag
gccgagcagcccgcaccggccgaacccgcgccgcggtcggcccaggatgagcagtcggct
caggccgcggcctcggcggacgcgtcggcgggaccgtccggtcgccgccgcgggccgcgt
acggccacggtccccgcccagggggcgccggcggacgccgccgccccggggcagtcggcg
cccgagcaggccgtcgacgcgtccgaggcgcccacgcagccgctcccggtgccgccggcc
gcgcaaccgcgggcggactccgcgtcggcgggcccggccgcggagtcgagcggtgtggac
ggccctgacgtaccgtcgtcggcgccggccgcgggacccacggcggacgccgcggcggcg
gctccggccgcggcacacgatgcggcggcggaccagcccgacacaccgcggtcggcaccg
tccgacgcggccggaccgagcgcggctccgcagccgggcgcggcgggccaacccgcggag
caggcccggaccgccgacgaatccgccgcgaacacacaaccggcggcggccgattcggcc
gagcacgccccgggcacgccggacggggacgactccgccggggagaccggcgcggaccag
gcgggccgaccggaacacccggagcagccggaacagaccgctgacggcacgaccccggac
accgggaccgccgccccgcagccggcgcccgcgaacgcggcacccgcggccaccgacccg
gcggcagccgcacccgcgcggggcgacgcgaccgccgagccgtccgacgcgcgggaggag
ccggccggaggcgccgccccgcaggccgcacccgaggccgcgggctccgccgacgacgcc
gccccggccgctgccgaatcgcccgccggttcccccgaggccgaggccggggagcttccg
gagggcggccgggacgggcagggggctcagaacgggcaggacagccaagccgccgcggga
ggcgcccaaggcgtccgcgacggccgcggcggcgacggcccgagccccggcactgcggac
gcgcaggaaggccccgctgacgcccggagcgccgacgaggcgcaggccgccgccgaagcc
gcgggcgaggacaacgccgacgaggccacgggcgacccggctcgcgccgccgaggccgag
cccgagcccggtgaggaccccgccgaccccgcgcccggctacgacgacgccgcccgcgag
gcggtccaccgcgtcatgcgcgaacgccgcgacgtgcgcaccggtttccgttcggacccg
gtgcccgacgaggtcctgatccgcgtcctccaggccgcgcaccacgcacccagcgtcggt
tactcgcagccgtgggatttcgtggtgatccgctcggaggagacccgcgccaacgtccac
gcgttggcggcccggcagcgcgaggcgtacgcggcgtccctgcccaaggcccgggccaag
cagttcctcgggatcaagaccgaggcgatcctggagacgccggtcaacatcgtcgtgacc
gtcgactcgacgcgcggcgggcgccacacgctgggacgccagacgcagccgcagatgggc
ccgtactccagcgccctcgcggtcgagaacctgtggctcgcggcccgcgccgagggcctg
ggcgtcgggtgggtcagcttcttcgacgagcgcgagctgcgctcggagctgggcctgccc
gagcacctggagatcgtggcgtacctgtgcgtgggcttcgtcgacgcgttcccgggcgaa
cccgagctggagcaggccgggtgggccaagcaacggccgctgtcgtgggtcgtgcacgag
gaggagtacgggcggcgcgggcttccgggcgaggacccggtgcgcctgctcgacgagacg
atccgctcggtgcgcccgctcgacgccaaggcgctgagcgcggcgtgggaccggcacaag
gtcatgaccaagccggccggttcgctgggcgtgctggagatgatctcggcccagctggcc
gggctggcgcgcgtgtgtccgccgccggtgcccgagcccgccgccgtcgcggtgttcgcc
gccgatcacggcgtgcacgcccaaggcgtatcgccgtggccgcaggaagtcaccgcgcag
atggtgcacaacttcctcggcggcggcgcggtcgtcaacgcgttcgcccgccaggtgggt
gtcgaggtgtgcgtcgtcgacgtcggtgtcgccgccgaactgcccgtcgcctcgggcctg
ttgccgcgaaaggtccgccccgggaccggcgacatgaccgagggcccggcgatgacgcgc
gaggaggtcatgcgcgccatagaggtcggtgtcgagaccgcccgcgacctggtgaccgcg
ggcaaccgctgcctgctgaccggcgacatgggcatcgcgaacaccaccgcgtcggcggcg
ctgatcgcggtgttcaccggctccgacgtcgccgaggtcaccggccgcggcaccgggatc
gacgaccacacgcacgaccacaaggtgcaggtcatccgggccgcactcgcccggcacacc
ccggacccggacgacccggtcggggtcctcgccgcggtcggcggtctggagcacgccgcg
ctcgcggggttcatcctcggtgccgcggcgatgcggacgccggtgatcctggacggggtc
atcgcgggggccgcggccctggtcgcgcaccgcatcgcgcccgacgccctcgcggcgtgt
gtcgcgggccaccgatcggcggaaccgggccacgccgccgccctggcgaaactggggctg
cgtccgctggtcgagctggaactgcgcctcggcgaggggacgggtgccgtgttggccctg
cccctggtgcagagcgcggcccgcgtgatgcacgatgtggccacgttcgactccgccgga
gtcagcggcaagaccggctga
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integrated database retrieval system
