Yimella sp. cx-51: J5M86_08730
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Entry
J5M86_08730 CDS
T07124
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
yim
Yimella sp. cx-51
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yim03032
]
J5M86_08730
03400 DNA repair and recombination proteins [BR:
yim03400
]
J5M86_08730
Enzymes [BR:
yim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J5M86_08730
DNA replication proteins [BR:
yim03032
]
Prokaryotic type
DNA Topoisomerases
J5M86_08730
DNA repair and recombination proteins [BR:
yim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J5M86_08730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
DUF6071
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
QTH37008
LinkDB
All DBs
Position
1831602..1834034
Genome browser
AA seq
810 aa
AA seq
DB search
MARRRKDDQPLEPDFVENIVDINVEDEMQTAFLEYAYSVIYSRALPDARDGLKPVQRRIL
YSMNELGLRPDRNHVKCSRVVGEVMGKYHPHGDTAIYDALVRMAQSWTMRLPLVDGHGNF
GSLDEGPAASRYTEARLAPSALLMTTSLRENTVDYVPNYDESEQQPSVLPAAFPNLLVNG
AAGIAVGMATNMPPHNLVEVIGAARHLIANPDCSLDDLMKFVPGPDLPMGGQIVGLEGIR
DAYLTGRGSFRTRATVRVENVTPRKKGLIVTELPYLVGPEKVIEKIKDLHQAKKLQGISD
VKDLSDRRSGLQLVIEIKNGFNPEAVLETLYKLTPLEESFGINNVALVDGQPRTLGLKEL
LKVYVDFRIDVVRRRTQFRLGQKKDRLHLVDGLLIAIVDIDEVIQVIRSSDDAGIARERL
MQIFDLTEAQANYILELQLRRLTKFSRIELEKEAEELRREIEELEAILADEKVLHKLVST
ELADVAKTHGTPRRTVLLEASGAPKVTSTPLEVADDPCWVLLSSTGLLARTTTAEPLPDS
GSRKKHDAIIGAVRTTVRGEFGVVTSSGRVARLTPLDLPTLVPTNDAPALSGGAPLAAFV
DLPAGEKVLTLMSLDPTAPGLAVGTAQGVVKRVNTDYPNKDSFEIITLKDGDEVVGATHV
DSDTAELTFITSAAHLLHFPASIVRPQGRAGGGMAGIKLSPGARAIWFGAVSAPDESVVV
TVADSSGALPGTGGGSIKVTEFAAYPGKGRATGGVRCQRFLRGEDELVFAWAGKAPRAAT
SAGVAVDLPEADTRRDGSGIPLTGNLSAIG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgccgcaaggacgaccaaccactcgaacccgacttcgtcgagaacatcgtc
gacatcaatgtcgaggacgagatgcagacggcgttcctggagtacgcctattcggtcatc
tactcccgcgcgctgcctgacgcccgcgacggcttgaaaccggtgcagcgccgcatcctc
tactcgatgaacgagctcggtctgcgtcctgaccgcaaccacgtgaagtgttcgcgcgtg
gtcggcgaggtcatgggtaagtaccacccgcacggcgacaccgcgatctacgacgccctg
gtgcgcatggcgcagtcgtggacgatgcgcctgccgctcgtcgatggtcacggcaacttc
ggttcgctggacgaaggtccagccgcttcccgttacaccgaggcccgccttgctccgtcc
gcgttgctgatgaccacctcgctgcgcgagaacaccgtcgactacgtgcccaactacgac
gagtcggagcagcagccgtccgtgctgccggccgccttccccaacctgttggtcaacggc
gccgccgggatagccgtcggcatggccaccaacatgccgccgcacaacctggtcgaggtc
atcggcgcagcccgccacctcatcgccaatcccgactgctcgctggacgacctgatgaag
ttcgtgcccggccccgacctgccgatgggcggtcagatcgtcggcctggaaggcatccgg
gacgcctatctcaccggacgcggttcgttccgcacgcgcgcgaccgtccgcgtcgagaac
gtcaccccgcgcaagaagggtctgatcgtcaccgaactgccctatctggtcgggccggag
aaggtcatcgagaagatcaaggacctgcaccaggccaagaaactgcagggcatctctgac
gtcaaagacctctccgaccggcgcagtggtctgcaactggtcatcgagatcaagaacggt
ttcaaccccgaagcggtcctggagaccctctacaagctcaccccgctggaagagtcgttc
ggcatcaacaatgtcgccctcgtcgacggtcagccgcgcaccctgggcctgaaggaactg
ctgaaggtctacgtcgatttccgcatcgacgtggtgcgccgacgcacgcagttccgcctg
ggacagaagaaggaccgcctgcacctggtcgacggcctgttgatcgcgatcgtcgacatc
gacgaagtgatccaggtgatccgtagctccgacgacgccggcatcgcccgcgaacggctc
atgcagatcttcgacctgaccgaggcacaggccaactacatcctcgaactccagctgcgc
cggctcacgaagttctcccgtatcgagctggagaaggaggccgaggagctgcgccgcgag
atcgaagaactcgaggcgatcctggccgacgagaaggtgctgcacaaactggtctccacc
gaactcgccgacgtcgccaagacccacggcaccccgcgccgcacggtgctgctcgaagcg
tccggggctccgaaggtcacctccaccccgctggaagtcgcggacgacccgtgctgggtg
ttgctgtcgtccactggattgctggcgcgcacgaccaccgcagaaccgttgcccgacagt
ggttctcgcaagaagcacgacgcgatcatcggcgcagtacgcaccactgtgcggggcgag
ttcggggtggtgacctcctcgggtcgggtcgcccgtctgacgccgctcgatctccccacg
ttggtgccgaccaacgacgcgcccgccctttctggtggagcaccgctcgcggcgttcgtc
gatctgccagcgggcgagaaggtgctgacgctcatgagcctcgacccgaccgctccgggg
ttggcggtcggcaccgcacagggcgtggtgaaacgggtgaacaccgactacccgaacaag
gactccttcgagatcatcacgctcaaggacggcgacgaagtggtcggtgccacccacgtc
gattcagacacagccgaactcacgttcatcacgtccgccgctcatctgctgcacttcccc
gcatcgatcgtccgaccgcagggtcgggccggtggcggcatggccggcatcaagctctcc
cccggcgcgcgagccatctggttcggggctgtctcagcgccggacgaatccgtcgtggtg
accgtcgccgactcctccggtgcgcttcccggcaccggcggcggctcgatcaaggtgact
gagttcgccgcctacccgggaaagggccgcgcaacaggtggcgtgcgctgccagcgtttc
ctgcgcggcgaggacgaactggtcttcgcctgggccggcaaggcgccgcgcgccgcgacg
tctgctggtgtcgcggtcgacctgcccgaggccgacacgcgccgcgacggcagtggaatt
ccgttgaccggcaacctttctgccatcggctga
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