Yimella sp. cx-51: J5M86_11665
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Entry
J5M86_11665 CDS
T07124
Name
(GenBank) tandem-95 repeat protein
KO
K20276
large repetitive protein
Organism
yim
Yimella sp. cx-51
Pathway
yim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J5M86_11665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Bact_surface_Ig-like
Tissue_fac
Motif
Other DBs
NCBI-ProteinID:
QTH37525
LinkDB
All DBs
Position
complement(2450272..2456274)
Genome browser
AA seq
2000 aa
AA seq
DB search
MSSRGLRNAAVLCVMSLVVGLLAAFHQGVPTKDLKLNDGGVWVVNQALRLAAHLNYPSRT
LDGGVQSTAATFDVDQSGNTIALRDTAAGGIQGINPATLVLASALRVPLGMSTSQGGDTL
AIADPKAGKVWALDARTATEFSATSTPVVSGLPGARLVTGVDGAVNAVGTGGVLRRIARQ
GASWTAQDAGTMPGVTDVSKLVLTAVGDQMVALDTVRGEVHSAKGTVALGKAADAVLQQP
GEAAAQVRLATATELISVPLDAGSPTRVAAGSVTAAGVPAAPVVVAGCTYAAWSGTGNYR
RDCGDEAKSEARTVSALAGGGQLVYRVNRAVVVLNDIGNGDVYLVDKNMQKVNNWQDIRA
QLEDQKKRDSKQSTTETTAQRSDADKDTNNRKPIALDDAYGVRAGTSVTLPALDNDSDPD
GDVLVAKPTTSTPVGKVSAVRGGQALQIETNASATGAGTFRYAVSDGRGGTAEASVKVTV
FPTSVQNPPISKRTSTLEIVQGGRVAYNVLQDWIDPEGDPIFLKSAASTKGATVTYNEQG
SVTIVIDGTAAGTLNVPVVVSDGTKDASGSITVKVKSRGNVLPVANTDFVLAPAGVDVVV
KPLLNDTDANGDSLRLVQAGPVPASGQGSLRVDNSSGTLTLNVAKAGTYYLPYTVSDGTG
NSTGRIRVDVAAPGAKAQPPVAENDLAALPVGGSVLVPVLDNDVDPAGGVLVLQLLQLPT
ASSLQVEMVGREMVRVTAPGGLTGRQSFSYTVSNGQASATAAVAVVPVPPPATVSGPEAR
PDAATVRAGDIVTLDVLANDRSPGGLTLTLDQKLETVGSKPLGTAFVSAGKVRFLAGATP
GDVHLTYTVRDSRANLASADVHITVRAADKQNAAPTPSPLTLRLLAGTTAKVAVPLDGID
PDGDSVTLLGVDRPAGKGTVTVVDGQLQYAALPSATGSDTFTYAVADRFGAKGTATVTVG
IAPDSGQNQSPVAVADNVIARTGRQLSIPVLTNDFDPDGDKITVVAGSVKPVDGRTTAQA
TAVGPRVDLITPETVGVQRFYYEITDGRGGTGRGVLAVDVRKDAPLLAPVARDDIIAAST
VANKKSVTVDVLANDEDPDGSSAALTLKTGAAGVQVTADRKLIVPVTDQRQLMLYEVTDP
DGQVGRAVIVVPPATGLPPTLRLDRVPLTATAGAPLSISIPNYLTVRSGRSVQLQNASGV
KTPAGAAVQVKDPRNLVFTADKTFAGPSSVTFPVTDGTTPNDPAGLTAVITIPITVKPAP
NPPKAEASTPVIRPTAVQVAIGEAAVSVDVAAMVTDRDPGAMAGMQYRIGGAPAGFTASL
NGRTLRVGASGNARVGQTGSIALTATSPSGKSATAPIPVTVVGSTRPPMTVLPADLTVKA
GQSATVDITSYVTNPYADSGKPLTLVGAPVRASGQGSVTASGTRVTVSPAADATGQMSVT
YRVADASGQVDRQVQGVIRVTVLGKPSTPTGVTARSQASKTATVSWTDGDNNGSPLTGHV
VKWPGGQQNCGAGSSCTINGLPNGRPLTFSVMARNAVGDSGWSGSSAAVTPDAKPSAPAS
LTATAGKTSVALSWPAAVVDGTKVTKHTVTSSNGASRDNGTSTSLNWTGLPGGTGEICFS
VTATNAAGTSEPGPRSCATPFDQPGAFAVNTPAVTEAPDHTSNSVSVSWSPANANGSPVT
YSVAWSGGTTQCQNQAATTCSFNVTATGTISVKVTAKNAGGESVAQVSGVNVARRVGSPT
SVTARATGTDGQIAVTASGAAGNGNTVTYQARNGAGAWVNLPGGSGNVGGFTNGQAVQVS
VRAVGDRSGPGNEVSAPAATPYGRPTAPQPSCSASGAQDIACSWSGGSGNGRPATYALTR
DASGGVSDSGSYTFSSVGYSTTRTLCVRVTQAESGATDEKCASATSAAEPPPPVYRGDYQ
TRSVDCGGRTCTQVRLFGYAPNSRVRCAAGSSGPGYRAWEWVGNVDGNGNHDWISNANVG
STSLFYGAISDPAHDFCSPN
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcgcggtctgcgtaacgcggcggtcctgtgtgtcatgtcgttggtggtcggg
ctgctcgccgctttccatcaaggcgtcccgaccaaggacctcaagctcaacgacggcggt
gtttgggtcgtcaaccaagcgctgcgactggctgcgcatctgaactacccctcccgcacc
ttggacggtggggtgcagtcgaccgctgcaaccttcgacgtggatcaatcaggcaacacc
attgcgctgcgggacactgccgccggtgggatccagggaatcaatccagccacgctcgtc
ctggccagtgcgcttcgggtaccgctagggatgtccacctcacaagggggcgacacgctg
gcgatagctgaccccaaagcgggcaaggtgtgggcactcgatgcacgcacagccacggag
ttctcggcaacgtccacgcccgtggtgtcaggtctgcccggtgcacgcttggtgaccggg
gtggacggcgccgtcaacgccgtcggcaccggcggagttctgcgcaggattgctcggcag
ggtgcgtcgtggacggcgcaggatgccggcacgatgccgggcgtcaccgatgtatcgaag
ttggtgctgaccgccgtgggtgaccaaatggtcgcgctcgacacggttcggggtgaagtc
cattcggcaaagggaacggtggctctggggaaggcagccgatgctgtgctgcagcagccg
ggcgaggccgctgctcaagtgcgcctggcgacggcgaccgagctgatctccgtgccgctc
gatgccggaagtccgacgcgcgttgcagcaggaagtgtcacggctgccggagtgcccgcc
gctcctgtggttgttgctgggtgcacttatgccgcttggtcaggcaccgggaactaccgg
cgtgactgcggtgacgaggcaaagagcgaggcgcgcaccgtgtcggcgcttgcaggtggc
gggcaactggtctatcgggtcaaccgggccgtggtggtgctcaacgacatcggcaacggc
gacgtctacttggtcgacaagaacatgcagaaggtcaacaactggcaggacatccgggca
cagttggaagaccagaagaagcgcgactccaagcagagcaccaccgaaaccaccgcgcag
cgctccgatgctgacaaggacaccaacaaccgcaagccgattgctctcgatgacgcatat
ggagtgagagcgggcacctctgtgaccttgcctgcgctcgacaacgactccgatcccgat
ggggacgtgttggtagccaagccgaccacgtccactccggtgggcaaggtctccgcggtg
cgaggagggcaagcgcttcagattgaaaccaatgcatcggcaaccggcgccggcaccttc
cgctacgccgtttccgatggtcgtggcggcaccgcggaggcctccgtgaaggtcaccgtc
ttcccgacgagcgtgcagaatccgccgatctcgaagcgcacgtcgaccctggagatcgtg
cagggcggccgcgtcgcatacaacgtgttgcaggactggatcgaccccgagggcgacccg
atcttcctgaagtcggccgcgtcaaccaagggtgcgaccgtcacctacaacgagcaggga
tcggtgacgatcgtcatcgacggtacggcggcaggcacgctcaacgtgccggtggtggtg
agcgacggcacgaaggatgcatcagggtcgatcacggtcaaggtgaagtcgcggggcaac
gtgttgccggttgccaacaccgacttcgtgcttgccccggccggagttgacgtggtggtc
aaaccattgctcaacgacaccgatgccaacggagattcattgcggctggtgcaggcgggc
cctgtgccagcttcgggtcagggatcgctgcgcgtcgacaactcgtcgggcacattgacc
ctcaacgttgccaaagcaggcacgtactacctgccctacacggtctccgacggcaccggc
aactcgacaggtcgaatccgtgtggatgttgcggcgccaggtgcaaaagcccagccgccg
gtcgccgagaacgacctggcggcgctacccgtcggcggttcagtgctcgtgcccgtactc
gacaacgacgtcgatcctgccggcggagtgttggtgctgcagttgttgcagctgcccacg
gcgtcctcgctccaggtggagatggtcgggcgcgaaatggtgcgcgtcacggcaccgggc
gggctcaccggacgccagagtttcagttacacggtgtcgaacgggcaggcatctgccact
gctgcggtggcggtggtgccggtgccgccgcccgcgacggtttccggcccggaagcccgg
ccggatgcagcgaccgtgcgagccggcgacatcgtcaccctcgatgtgctcgccaacgat
cgctcgcccggcgggctcacgttgaccctcgaccagaaactggagacggtcggatcgaaa
cctctcggcaccgcattcgtttcggctggcaaggtgcgcttcttggcgggtgcgacgcca
ggagatgtgcacctcacctacacggttcgtgacagccgcgccaacctcgcctctgcggac
gtccacatcaccgtgcgagcggcggacaagcagaacgccgcaccgactcccagcccgctc
accctgcgtctgttggccggcaccaccgcaaaggtcgcggtgccgctggacggcatcgat
ccggatggcgactcggtcacgttgctaggtgtcgaccgacccgcgggcaagggaacggtg
accgtcgtcgacgggcagttgcagtacgccgcgcttcccagtgcaaccggctccgacacg
ttcacctacgcggtggctgatcggttcggagccaagggcaccgccacggtgacagtgggt
atcgcaccagattcaggtcagaaccaatcgccggtggcggtggccgacaacgtgattgcc
cgcacgggtcggcagttgtcgattccggtgctcaccaacgacttcgacccggacggtgac
aagatcactgtggtggcgggctcggtgaagccagtcgatgggcgcacgactgcgcaggcg
acagccgtggggccacgcgtcgacctgatcacccccgaaaccgttggggtgcaacgtttt
tactacgagatcaccgacggtcgtggcggcactggccgcggggttctggcagtcgatgtt
cgaaaagacgctccgctgttggcgcccgtcgcccgtgacgacatcatcgcggcatcgacc
gttgccaacaagaagtcggtgaccgtcgacgtacttgccaatgacgaggacccggatgga
tcctccgctgcattgacgctgaagaccggtgcggccggcgtccaggtgacggcagatcgc
aaactcatcgttccggtcaccgaccaacggcaattgatgctctacgaggtgactgacccg
gacggtcaggttggccgagcggtgattgtggtgccgccggcgacgggcctgccgcccacg
ctgcgtctcgaccgggtgccactgacagctacagccggcgcgccgctttcgatctcgatc
ccgaactacctcacggtgcgctccggacgctcggtgcagcttcagaacgcctcaggggtc
aagacgcccgcgggtgcggctgtgcaggtgaaggacccgcgcaacctggtattcaccgca
gacaaaaccttcgcggggccgagttcggtgactttccccgtgactgacggtacgaccccg
aacgatcccgccggcctcactgcggtcatcacgattccgatcaccgtgaagccggccccc
aacccgccgaaggctgaggccagcactccggtgattcgtcccaccgcggtgcaggtggcg
atcggcgaggccgcggtgtcggtcgacgtggctgcgatggtcactgaccgagacccgggc
gccatggctggcatgcagtaccgaatcggcggtgcaccagctggattcaccgcctcgctc
aatggacgcaccctgagggtcggggcatcaggaaatgctcgagtcggccagaccggaagc
atcgctctcaccgccacctcgccaagtggcaagagtgcaacagcgcccatcccggtcacc
gtggtcgggtcgacccgacccccgatgaccgtgcttcccgccgacctcaccgtgaaggcc
gggcagtcggcaactgtcgacatcacgtcctatgtcaccaatccctacgcggacagcggc
aagccactgacccttgtgggcgcgcccgttcgcgcgtccggtcagggatcggtgacggct
agtggcacgcgcgtgacggtcagcccggcagcagacgccaccggtcagatgtcggtcacc
tatcgggtggcggacgcctcgggtcaggtggatcgtcaggtgcaaggcgtgattcgcgtg
actgtgctcggaaagccaagcacccccaccggcgtcaccgctcgttctcaagcctcgaag
acggccacggtgagttggaccgacggcgacaacaatggttctccgctgaccggccatgtc
gtcaagtggcctggtggacaacagaattgcggtgctggtagctcgtgcacgatcaacgga
ttgccgaacggccggccactcacctttagcgtgatggcgcgtaacgcagtaggcgattct
ggatggtccgggtcgtcggcagctgtcacgcccgacgccaagccgagcgcccccgcatcg
ctcaccgccactgctggcaagacttcggtggcgttgtcctggcccgctgctgtggttgat
ggaacgaaggtgacgaagcacaccgtcacctccagcaacggtgccagccgagacaacggc
acgagtacttccctcaactggacgggtctgcccggaggcacgggcgagatctgtttcagc
gtcactgccaccaatgccgcgggaacctccgaacctggcccgcgttcgtgtgcgacaccg
ttcgatcaacccggtgcgttcgcggtcaacaccccggcagtcacggaggcccctgaccac
acgagcaactctgtttcggtctcctggtcgccggccaacgccaacggcagccccgtcacc
tactcggtggcgtggtcgggcggcacgacgcagtgtcagaaccaagcggcgacaacctgc
tcgttcaacgtgacggccacgggcaccatttcggtgaaggtcaccgcgaagaacgccggt
ggcgagtcagttgcgcaggtttcaggcgtcaacgtggcccgccgggtcgggagcccgacg
tcggtgaccgcgcgagcgaccggcaccgatggtcagattgcggtcaccgcgtccggagcc
gccggcaacggcaacaccgtgacctaccaagcacgcaatggggctggggcatgggtcaac
ctgcctggtggatccggcaatgtgggcggcttcaccaacggccaggccgtgcaggtctcg
gtgcgagcggtcggcgacaggtctggtcctggtaacgaagtgtcggctcccgcagcgact
ccctatggtcggccgaccgcaccgcagcccagttgcagtgccagtggcgctcaggacatc
gcgtgctcctggtcaggcggttcgggcaacgggcgacccgcgacctacgccctcacccgg
gacgcctctggcggcgtcagtgacagtggcagctacaccttctccagcgtcggctacagc
accacccggacgttgtgtgtgcgcgtcacccaggccgagtcaggcgccacggacgagaag
tgtgcgtccgcgaccagtgcggcagagccgccaccgccggtctatcgcggggattaccag
acccgctctgtcgactgcggcggtaggacgtgcacccaggtgaggctcttcggttacgcc
ccgaattccagagttcggtgtgccgccgggagctccggcccgggataccgagcttgggaa
tgggtgggaaacgttgacgggaacggaaatcacgactggatttcgaatgcgaacgtcgga
agcacgtctctgttctatggagcgatcagtgaccccgcccatgacttctgttcgcccaac
tga
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