Yersinia intermedia: CH53_2889
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Entry
CH53_2889 CDS
T03608
Name
(GenBank) RND transporter, hydrophobe/amphiphile efflux-1 family protein
KO
K18138
multidrug efflux pump
Organism
yin
Yersinia intermedia
Pathway
yin01501
beta-Lactam resistance
yin01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH53_2889
01503 Cationic antimicrobial peptide (CAMP) resistance
CH53_2889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yin02000
]
CH53_2889
01504 Antimicrobial resistance genes [BR:
yin01504
]
CH53_2889
Transporters [BR:
yin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CH53_2889
Antimicrobial resistance genes [BR:
yin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CH53_2889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AJJ17555
UniProt:
A0A0T9M665
LinkDB
All DBs
Position
complement(3258113..3261265)
Genome browser
AA seq
1050 aa
AA seq
DB search
MAKFFIDRPIFAWVLAIILMLAGALAIMKLPVAQYPTIAPPAITISANYPGADATTVQNT
VTQVIEQNMNGIDNLLYMSSSSDSSGNVQLTLTFNSGTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGVSVEKSSSSFLMVAGFISEDGTMQQEDIADYVGSNVKDPISRTLGVGDVQLFGS
QYAMRIWMDPHKLNNFKLTPVDVINAIKVQNNQVAAGQLGGTPPVPGQELNSSIIAQTRL
TNAEEFSQILLKVNTDGSQVRLKDVAIVKLGAESYNIIARYNGKPAAGIGIKLATGANAL
DTSAAVKAELAKLQPFFPNGLKVVYPYDTTPFVKISINEVVKTLIEAIILVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
QEEGLPPKEATKKSMEQIQGALVGIAMVLSAVFIPMAFFGGATGAIYRQFSITIVSAMVL
SVLVALILTPALCATMLKPITKGEHGPSTGFFGWFNRMFEKSTHHYTDSVANILRSTGRY
LVIYLVIVIGMGVLFLRLPTSFLPEEDQGVFLTMVQMPAGATQERTQKVLNQVTDYYLDK
EKDVVNSVFTVNGFGFSGQGQNTGLAFVSLKNWDERPGDQNKVPAIVGRASAAFSQIKDG
LVFAFNLPAIVELGTATGFDFQLIDQGNLGHQKLTEARNQLLGMAAQHADMLVGMRPNGL
EDTPQFKVEVDQEKAQALGVSISDINTTLGSAMGGSYVNDFIDRGRVKKVYVQADAPFRM
LPDDIDKWYVRNSTGQMVSFNNFSTAKWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAM
DLMQELAAKLPSGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGVVGALLAASLRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLV
ESTLEAVRMRLRPILMTSLAFILGVLPLVISSGAGSGAQNAVGTGVMGGMITATVLAIFF
VPVFFVVVRRRFSRKSEDVEHSHAVDHKAK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttctttatagatcgccctattttcgcttgggttctcgccatcattttgatg
ttggctggtgcccttgcgattatgaaattacccgttgcgcaatatccaaccattgcgccg
ccggcaattacaatctccgccaactatcctggcgccgatgcgactactgttcagaataca
gtaacgcaggttatcgaacagaacatgaacggtatcgataacctgctgtacatgtcttcc
agcagtgattcatccggtaacgttcagttgacgttgacctttaactcaggcactgacccg
gatatcgctcaggttcaggtccagaacaaactgcaattagccatgccattactgccgcaa
gaagtgcagcagcaaggtgtgagcgttgaaaagtccagtagtagcttcctgatggttgct
ggctttatttctgaagacggcaccatgcaacaagaagatattgcggactatgtgggttct
aacgttaaagatcccattagccgtaccctcggtgtgggggatgttcagttgtttggttcc
caatacgcaatgcgtatctggatggatccgcacaaactgaataacttcaaactgacaccg
gttgatgttattaacgccattaaagtacagaacaaccaagtggcggcaggtcagttaggg
gggacaccacctgtacccggtcaagaactgaactcatcaatcattgcgcagacccgctta
accaatgcagaagagttcagtcagatcttgttgaaagtgaatactgacggttctcaggtt
cgtctaaaagatgtggctatcgttaaactgggggctgaaagctataacatcatcgcccgt
tataacggtaaacctgcggcagggatcggtattaaactggcaaccggtgctaacgccctg
gacacctctgcggcagtaaaagctgaactggcgaaattacaacccttcttccctaatggg
ttgaaagtggtttatccgtacgacaccacgccattcgttaaaatctccattaacgaagtg
gttaaaacactgattgaagccatcatcttggtgttcctggtcatgtatctgttcttgcag
aacttccgggcaacgttgattccaacgattgcagtaccggtcgtattgctgggtactttc
gctattctctccgcctttggctattcgataaacaccctaacgatgttcgggatggtgttg
gcgataggtctattggtcgatgacgccatcgtggtggtagagaacgtcgaacgtgtgatg
caagaggaagggttaccaccgaaagaagccaccaaaaagtctatggagcaaatccagggc
gcattggtggggatcgcgatggtactgtcggcggtatttatcccgatggccttctttggc
ggcgcaactggggcaatctatcgtcagttctctatcaccatcgtttctgccatggtgctt
tcggttctggtggcattgattctgacacccgcactgtgcgcaacaatgctgaaaccgatt
accaaaggtgagcatggcccgagtaccggcttcttcggctggtttaaccgcatgtttgag
aaaagcacccatcactacactgacagcgttgccaatattttgcgcagcactggccgttat
ttggtgatctatctggtgattgtgattggtatgggcgtgttgttcctgcgcttgccgaca
tcattcttaccagaagaagatcagggtgtgttcctgaccatggtgcaaatgcctgcaggg
gcgacgcaagaacgtactcagaaagtgcttaatcaggttactgactattatctcgacaaa
gaaaaagacgtggttaactcagtatttaccgttaacggcttcggtttcagtggtcagggt
cagaacaccggtctggcattcgtcagtctgaaaaactgggatgagcgcccaggtgaccag
aacaaagttccggcaatcgtcggccgcgcatctgctgccttctcgcaaatcaaagacggt
ttggtattcgcctttaacttgccagcgattgtggagctgggtaccgctaccggctttgac
ttccagttaattgatcaaggtaaccttgggcatcaaaaattaactgaagcgcgtaaccaa
ctgctcggcatggcggcgcaacacgcagatatgctggtcggaatgcggccgaacggactg
gaagatacacctcagttcaaagtggaagttgatcaggaaaaagcacaagctcttggtgtt
tctatttccgatatcaataccacgctcggttcagcaatgggcggcagttacgtaaacgac
tttatcgaccgtggtcgtgtgaagaaagtttatgtacaggctgatgcgcctttccgtatg
ttaccggatgatattgataagtggtatgtccgtaacagcacgggtcaaatggtgtcgttt
aataacttctccaccgcgaaatgggaatacggctcacctcgacttgaacgttacaacggt
ctgccatccatggaaattctggggcaagctgcaccaggtaagagtaccggtgaggcaatg
gacctgatgcaagagctggcggctaaattgccaagcggcattggttatgattggacaggc
atgtcttatcaagaacgtctgtcaggtaaccaggctccagcgttgtatgccatctcactg
attgtggtgttcttatgtctggctgcgctgtatgaaagctggtcgattccattctcagtt
atgttggtagtgccactgggtgtcgtgggtgcgttactggcggcctcgttgcgtggcctc
aataacgacgtttacttccaggtcggcttattgaccactatcgggctatcggctaagaac
gccatcttgattgttgagtttgctaaagacttaatggacaaagaaggtaaaggcttggtg
gaatcaacgttggaagcagtacgtatgcgtctgcgcccaattctgatgacatcactggcc
tttatcctaggggttctgccactggttatcagtagtggcgcaggttctggtgcacagaat
gcggtaggtaccggtgtgatgggcgggatgataaccgcaactgtactggctatcttcttt
gttccggtattcttcgtggtagttcgccgtcgctttagtcgaaaaagcgaagatgtagag
cactcacatgcggttgaccataaggccaagtaa
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