Yersinia intermedia: CH53_4046
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Entry
CH53_4046 CDS
T03608
Symbol
nifJ
Name
(GenBank) ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
yin
Yersinia intermedia
Pathway
yin00010
Glycolysis / Gluconeogenesis
yin00020
Citrate cycle (TCA cycle)
yin00620
Pyruvate metabolism
yin00650
Butanoate metabolism
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01120
Microbial metabolism in diverse environments
yin01200
Carbon metabolism
yin01210
2-Oxocarboxylic acid metabolism
Module
yin_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CH53_4046 (nifJ)
00020 Citrate cycle (TCA cycle)
CH53_4046 (nifJ)
00620 Pyruvate metabolism
CH53_4046 (nifJ)
00650 Butanoate metabolism
CH53_4046 (nifJ)
Enzymes [BR:
yin01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
CH53_4046 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_10
Fer4
TPP_enzyme_C
Fer4_16
Fer4_6
Fer4_9
Fer4_21
Fer4_8
Fer4_2
Fer4_17
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
AJJ18377
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Position
4499313..4502849
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AA seq
1178 aa
AA seq
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MITTDGNSAVASVAYRASEVIAIYPITPSSTMAELADAWSGDGKVNIWGDVPRVVEMQSE
GGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTIATHALSIF
GDHSDVMAVRQTGCTMLCASSVQEAQDFALISQVATLNSRIPFIHFFDGFRTSHEINKIV
PLSDDTLRQLLPQKGIDDHRSRALSPDHPVVRGTSANPDTYFQSREATNPWYNNTYQHVA
DAMATFAEATGREYKPFEYYGHPQAERVIVLMGSAIGTCEEVIDTLLTRGEKVGVLKVRL
YRPFSAMHLLSVLPQSVTKIAVLDRTKEPGALAEPLYLDVMTALAEAYSRGERATLPKVI
GGRYGLSSKEFSPDCALAIFKELTLDLPRPRFTVGIFDDVTGLSLPLTDEKIEQRATLEA
LFYGLGSDGSVSATKNNIKIIGNSTSLYAQGYFVYDSKKAGGLTVSHLRISETPINSAYL
VSHADFVGCHQLQFIDTYQMAERLKPGGIFLINTPFSADEMWPRLPQEVQAVLHQRHARL
FVINAAKIARECKLGARINTVMQMAFFHLTQILPTAMAQEQLRAAIDRSYSNKGPEIVTR
NWQALDATLDALVEIPLQPINESSPMRPPIVSDQAPDFVKTVTATMLAGLGDALPVSAFP
PDGTWPVGTTQWEKRNIAENIPIWQPDLCTQCNHCVAACPHSAIRAKVVQPEAMSGAPDS
LQSLDVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPEVKAINMQPRLEHLVEE
KTHYDFFLKLPEIDKAQMERIDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRLL
IANATGCSSIYGGNLPTTPYTTNADGRGPAWANSLFEDNAEFGLGFRLTVDQHRQRVTRL
INQLAPQLPQELVEQLIHQDATPEVRREQVTQLRQLLRDIPGNDAQQLATDADYLVDKSI
WLIGGDGWAYDIGFGGLDHVLSLTENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHG
KRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYD
LAYSHDQMKQLTTTGFWPLYRFDPRRTDEGKAALALDSRPPSSDLTTTLLNEQRFRRLNT
QEPEVAAQLYAAAEKDLKKRYDFLSLLAGKTEKTVSEE
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgattactactgacggtaacagtgcagtagcttctgtggcctatcgcgccagtgaagtt
atcgccatctaccctattacgccaagttccaccatggcagaacttgctgatgcatggtct
ggggatggtaaagttaatatttggggagatgttcctcgcgtggttgaaatgcagtcagaa
ggcggagccattgccaccgtccatggcgcactgcaaactggcgcgctgtcgacctccttt
acctcttcgcagggattgctgttgatgatccccacgttgtataagttagcgggtgaactg
acccctttcgtgctacatgttgcagcccgaaccattgcgactcatgccttatccatcttt
ggcgatcactccgatgttatggccgtgcgccagaccggttgtaccatgctctgcgccagc
agtgtgcaagaagcacaagatttcgccctgatttcacaagtagcgacactcaatagccgc
attccatttattcatttctttgatggtttccgcacctcacatgaaatcaataaaattgtg
ccactcagtgatgacacgctacgccaattactgccgcaaaaagggatagatgaccaccgc
agccgggcactctcaccggatcatccggtagtacgcggtacttcagccaatcctgatact
tacttccagtcgcgtgaagccaccaacccttggtataacaatacttatcagcatgttgct
gatgctatggcgacttttgccgaggctacggggcgcgaatataaaccatttgaatattac
ggtcatccacaggcggagcgtgtcattgtcttgatgggttccgctatcggcacctgcgaa
gaagtgattgataccttattaacgcgtggcgaaaaagtgggtgtgttgaaagtgcgttta
taccgtcctttctctgcgatgcatctgttgagtgtcttacctcaatcagtaacaaaaata
gcagtgttggatcgcaccaaagaaccgggggcgctggctgagccactctatcttgatgta
atgaccgcattggcagaagcctatagccgtggcgagcgcgccacattgccaaaagtgatt
ggtggccgctatggtttatcttccaaggaattcagccccgattgcgctctggccattttc
aaagagttgacattggacctgcctcgcccacgtttcactgtagggatttttgatgatgtc
accggcctgtcattaccattgactgacgagaaaatcgagcaacgcgccactctggaggca
ctgttctatggcctgggcagtgatggctcagtctctgccactaaaaacaacatcaaaata
atcggcaacagcacctcgctgtatgcacagggttattttgtttatgactcgaaaaaagca
ggcggtctaaccgtttcacacttgcgcatcagtgaaaccccgatcaattccgcctatctg
gttagccatgccgattttgtcggttgccaccagttgcagtttattgatacctaccaaatg
gccgaacgactgaaacccggcggtattttcctgattaatacccccttcagtgcagatgaa
atgtggcctcgcctgccacaggaagtgcaagccgtgctgcatcagcgccatgcacggctg
tttgtgattaatgcggctaaaatcgcccgtgaatgcaaacttggcgcccgtattaatacc
gtaatgcagatggcgttcttccatttgacacagattttacctaccgccatggcgcaagag
cagttgcgggcagcgattgaccgcagttacagcaataaagggccagaaattgtcacgcgc
aactggcaggcactggatgcaactctggatgcattggttgaaatcccactacaaccgatt
aatgaaagcagcccgatgcgcccaccgatcgtctccgatcaagcacccgattttgtcaaa
actgtgaccgcaaccatgttagctggtttgggtgacgcgctaccggtgtcggccttcccg
cctgatggaacctggcctgtgggtacaacccagtgggaaaaacgcaatattgcagaaaat
attcctatctggcagcctgacctatgtacccagtgcaaccactgtgttgcggcctgccca
cactcagcaatccgtgccaaagtggtacagccagaggcgatgtcgggtgcaccagacagc
ctgcaatcgctcgatgtcaaagcccgtgatatgcgtgggcagaagtatgtgttgcaagtt
gcgcctgaagattgcaccggatgcaacctgtgctatgaggtctgtccggccaaagatcgc
cagaatcctgaagtcaaagccataaacatgcaaccacggctggaacatctggtggaagaa
aaaacgcactatgacttcttcctcaaattacctgaaatcgataaagcccaaatggaacgt
attgatatccgtacgtcacaattgatttccccactgtttgaatactctggagcctgttcg
ggttgtggtgagacgccgtatattaaattattgacccagttatatggcgatcgtctgtta
attgccaacgccaccggatgctcatcaatctatggcggcaatctgcctaccacgccttat
accaccaacgccgatggccgtgggccggcgtgggctaactcactgttcgaagataatgcc
gagttcggcctgggctttcgcctgactgtcgatcagcatcgtcagcgggtgacccgctta
atcaaccaactggcaccacagttgccgcaagagttggttgagcagttaatacatcaggat
gccacgccagaagtacgccgtgagcaagtcacccaattgcgtcagctactgcgtgacatt
ccgggtaatgatgctcaacaattggcaaccgatgcagattatctggtcgacaaatccatc
tggttgattggtggggacggctgggcatatgacatcggttttggtgggctagaccatgtg
ctgagcctgacagaaaacgtcaatgtgctggtgctcgatacccagtgttactccaacacc
ggcggccaacaatccaaagcgaccccgctcggggcggtgactaaattcggtgagcatggc
aaacgtaaggcgcgcaaagacttaggcgtcagtatgatgatgtatggccatgtttatgtc
gcacagatttcgctgggtgcgcagctcaatcaaacggtgaaggctattcaagaagcggaa
gcttatcctggcccatcgttgattatcgcttacagcccgtgtgaggagcacgggtatgat
ttggcctacagccatgatcagatgaaacaattaaccaccaccggtttctggccactatac
cgctttgacccgcgccgtacggacgagggaaaagcggctttggcattggactcccgcccg
ccaagcagtgacctgaccaccacgctgctcaatgagcaacgcttccgtcggctcaatacc
caagagcctgaagtagctgcacagttatacgcagcggcagagaaagacttgaaaaaacgc
tacgatttcctgagcttgctggcagggaaaacagaaaaaacagtgtctgaggagtaa
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