Yersinia intermedia: CH53_487
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Entry
CH53_487 CDS
T03608
Name
(GenBank) carbohydrate-selective porin, OprB family protein
KO
K07267
porin
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yin02000
]
CH53_487
Transporters [BR:
yin02000
]
Other transporters
Pores ion channels [TC:
1
]
CH53_487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AJJ21352
LinkDB
All DBs
Position
complement(568093..569514)
Genome browser
AA seq
473 aa
AA seq
DB search
MKPTLYLTRQMNSAAFYLLASTILFSSSALSEDLTGSGEYVEQSTPEWQGIALGFEPQQT
GLLGDMLGIRPILSEHGFNYSLAYLSQLSYNAGGGYNHDKQASYIDQFSLTFQQDLELYT
GIPDAVIEGNIVNRNHDNNLTRDRLQDPRANITDLSQESFGGQSITRLGWLTFARSFADQ
KLHWRIGLMNKVQDFDQIIPCDFQTLGLCGGKSANSLTWFNWNVHYWGTTLQYKLTDGLT
LKAGVMEQNPDAPSRGRAWSWSTKGSKGILLPLELELKTNAFQDLPGIYNLGVLYTNAEQ
RDLYNGVSGAPGATDPGGYRYHDNTWFFYSGFNQQVTKHQDDASRGLSVFYSMSLADQRT
NYMHYATSAGIRYRGLFDSRPQDWLGFGVSMVKLSDYYKDNQRYLNQINNVSDYANPRYS
PIPGHSITAELYYRFRVTSWLELQPDLQYWHSPAGVNQTQDAWVTGLKTVITF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaactttatatctgactcgtcagatgaattctgctgcattttatttgctggcc
tctaccattttattttcatcatcggcactaagcgaagatttaacgggaagtggcgaatat
gtcgagcaatcaacgccggagtggcaggggatcgcattaggttttgaaccgcagcaaacg
gggctgctaggcgatatgttaggcattcgccctattttatcggagcacggttttaattat
tcactcgcttacttgagtcaattatcatataacgcggggggcggctataatcatgataaa
caagcttcttatattgatcagttttcactgacttttcagcaggaccttgagttatatacg
ggtattcccgatgcggtaatcgaagggaatattgttaaccgtaatcatgataacaaccta
acgcgggatcggttacaagatcctcgggcgaatataaccgatttgtcgcaagaaagtttt
ggtggacagtcgattactcgcttgggctggttaacctttgcccgcagttttgcagatcag
aaactgcattggcgaattggtttgatgaataaagtgcaggattttgaccaaattattccc
tgcgattttcaaactcttggattatgtggtggtaaatcagcaaactcgctgacctggttt
aactggaacgtccattattggggaaccacactgcaatataagcttactgatggtttaaca
ttaaaagctggggtgatggagcaaaatcctgatgcgccgagccgtggtagagcatggagt
tggtcaaccaagggcagcaaaggcatattactgccgcttgaattggaattaaaaaccaat
gcgtttcaggatctacccggtatttataacctcggtgttctttataccaatgctgagcaa
cgggatctttataacggtgtctctggcgctcccggagcaaccgacccaggtggttatcgt
tatcatgataatacttggttcttttacagtgggttcaatcagcaggtaacaaaacatcag
gatgatgccagtcgtggtctaagtgtgttttacagcatgtcgttggcggatcaacggacc
aattacatgcattacgctacttccgcaggtatccgttatcgcggcttatttgatagccgc
ccacaagattggttgggattcggcgtatcaatggtcaaactgagtgattattataaagat
aatcaacgttatctgaatcaaatcaataatgtttccgattatgctaatccacgttactct
ccaattcctgggcattcgattaccgctgaactgtattatcgtttccgtgtcacttcatgg
ctggaattacaacccgacctacaatattggcactcaccagcaggggtaaaccaaacgcaa
gatgcgtgggtaaccggattaaaaacagttattacattctaa
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