Yersinia kristensenii: HRD70_12090
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Entry
HRD70_12090 CDS
T08672
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
yki
Yersinia kristensenii
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yki03400
]
HRD70_12090
DNA repair and recombination proteins [BR:
yki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HRD70_12090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zf-tcix
zf-ribbon_3
AAA_16
zinc_ribbon_2
AAA_22
UPF0547
SLFN-g3_helicase
AAA
DZR
Motif
Other DBs
NCBI-ProteinID:
QKJ15850
LinkDB
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Position
complement(2704129..2705886)
Genome browser
AA seq
585 aa
AA seq
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MAFTLRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVIFGSVQSVARNLSLFDSAFSLLIIDECH
RISDDDDSQYQQIIQHLRTTNPRLRLLGLTATPYRLGKGWIYQFHYHGITRGDGKSLFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGMFREADLDRELKQQQRITPH
IVSQIIEYAAHRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPAERDALITAFKQQQ
LHYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKEDCLILDYAGNP
HDLFTPEVGTSKPHSDSQPVQVFCPDCGFANIFWGKCTESGDIIEHYGRRCQGWFEDDKG
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGMG
LESGQDAKGEWLKITYYDEDGTHTSERFRLTTAAQRMAFEQIFLRPHQRAPGITLKWQTA
ADIIAQQALLRYPDFVVARRRGQWWQIREKIFDYQGRFRRADSLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctttcacactccgcccttatcaacaagaagccgtggacgcgacgctggctcatttt
cgtcgccatgccgaaccagcgctaattgtcttacccactggcgcgggtaaaagtctggtg
atagctgaattagccaaactggcgcgtggacgcgttttggtgttagcgcatgtcaaagaa
ctggtggcgcaaaatcatgccaaatattgtgcttacggtttagaggccgatatttttgcc
gcaggactgcaacaacgccaaagtgagggaaaagtgatctttggcagtgtgcaatccgtg
gcgcgaaatctgtcactgtttgatagcgccttttcactgctgattattgatgagtgccat
cgcatcagtgacgatgatgacagccaatatcagcaaattattcaacatttacgcaccacc
aacccacgattgcgtttgctggggctgacggcgaccccttaccgcttgggcaaaggctgg
atttaccaattccactatcacggtatcactcgtggtgatggcaagtccctattccgcgat
tgcatttatgaattacccctgcgttatatgattaagcacggctttctggtgccaccggag
cggttggatatgccggtcgtacaatatgatttcagccggttgaccagcaatagtgacggc
atgttccgtgaagcagatttagaccgagagcttaaacaacagcaaagaattactccgcat
attgttagccagatcattgaatatgccgcccatcggcggggtgtgatgatttttgccgcc
acggtcgaacatgctaaagaagtctatgggttactgcccaaaggcgaagctgcattggtg
agtgccggaacgccccccgcggaacgggatgctttaatcactgcttttaagcagcaacaa
ttacattacttggtgaatgtggcggtattgacgaccggatttgatgccccgcatgttgat
ttgattgcaattcttcgtccaaccgaatccgtcagcttgtatcaacaaattgttgggcga
ggtctgcgactctcgccgggcaaagaagattgtttgattctggattatgctggcaatccc
cacgaccttttcaccccggaagtgggcaccagcaaaccccacagcgacagccaaccggta
caagtcttttgcccagactgcggttttgccaatattttctggggaaaatgtaccgaatcc
ggcgacatcattgagcattatggtcgtcgctgtcagggttggtttgaggatgataaaggc
gcgcgagcccaatgtgattaccgtttccgctttaaatcctgcccacattgcggggcagaa
aatgatattgcagcccgccgctgtcatcagtgtcaggaggtgttggtcgaccccgatgat
atgctgaaagcagctctgaaattaaaagacgcgctggtattgcgttgtggcggaatgggt
ttggaaagtggccaggatgcaaaaggcgagtggctaaaaatcacctattacgacgaagat
ggcacccataccagtgagcgctttcgcttaaccaccgccgcccaacggatggcatttgag
caaattttcttgcgccctcatcaacgcgcgcctgggattacgctgaaatggcaaactgcc
gccgatatcattgctcagcaagcactattgcgttatcccgattttgttgtcgcccgccgt
cgtggacaatggtggcaaatcagggaaaagattttcgattatcaggggcgttttcggcga
gctgactctctcgcctga
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