Yersinia rochesterensis: CH54_1179
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Entry
CH54_1179 CDS
T03609
Name
(GenBank) glycosyl hydrolase family 20, catalytic domain protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00511
Other glycan degradation
ykr00520
Amino sugar and nucleotide sugar metabolism
ykr00600
Sphingolipid metabolism
ykr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
CH54_1179
09103 Lipid metabolism
00600 Sphingolipid metabolism
CH54_1179
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
CH54_1179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ykr03110
]
CH54_1179
Enzymes [BR:
ykr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
CH54_1179
Chaperones and folding catalysts [BR:
ykr03110
]
Intramolecular chaperones
Others
CH54_1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
AJJ34487
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All DBs
Position
complement(1284547..1287222)
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AA seq
891 aa
AA seq
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MNKFRLNALAAITATFGLMGYAHADTTNQQLVDQLSTLKVNYKILDNRAAENGVDCARLG
ADWASCNKVLITLTNTGDEIKGQDWAIYFHSIRRILTTDDDQFKITHLTGDLHKIEPTAK
FAGFPVNQAVEIPITGEYWQLFATDFMPRWYATSGDAQPKVLKSTDTEDINEYLTQFTGD
QWKRTKDDNNVLMTPASRFVKNEAVKRLAAANLRGQIIPTPMEVKIHQQDADLSQGVALD
LSALPKPAADAAQQRFELLGLKSDSAGFPIKTLIQPSAFKGDLAVSGAYELKIGEKGAQV
IGFDPAGVFYGLQSILSLVPVDGSKKIATLEAKDAPRFEYRGVFLDVGRNFKTKDAVLRL
LDQMAAYKLNKFHFHLSDDEGWRIEIPGLPELTDVGSKRCHDLTETTCLLPQLGSGPDSN
NLGSGHFTRADYIDILKYAKARQIDVIPEIDMPAHARAAVVSMEARYNNLMKQGKEKEAN
EFRLVDPTDDSQTTSVQLYERKSYLNPCLDSSKRFVDKVIGEMAQMHKEAGMPLNTWHFG
GDEAKNIRLGAGFQDKNSPIEPGKGIIDKSVEDKPWAKSQVCQDMVKQGKIQDVEHLSSH
FAIEVSKLVNAHGIEKMQAWQDGLKDAKDSKDFATKRVGVNFWDTLYWGGADSVNDWANK
GYEVVASNPDYVYFDMPYEVNPNERGYYWATRFNDEAKVFSFAPDNMPQNAETSVDRDGN
HFSAKSDKPWPGVQGISGQSWNETVRTDEQMEYMIFPRVLPLAERAWHRAPWEQDYQAGR
EYKGGETHRVDTKALNSDWQRFANIMGQRELAKLDKAGVAYRLPVPGARVVAGELEANIS
LPGLIIEYSTDGGKQWQKYDVKAQPKVSGDVLIRSTSPDGKRSSRAEPVKV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattcagattgaacgcgttagcggcaataaccgcaacctttggcttgatgggg
tacgcgcatgcggacaccactaaccaacagctggtggatcaactcagcacgttgaaagtt
aactataaaatactagataaccgcgctgctgaaaatggcgtggattgtgccaggttgggg
gctgactgggcatcatgtaataaggtcttgattactttgaccaacaccggggatgagatc
aaaggccaagattgggccatttacttccacagcatccgtcggattctgactaccgatgac
gaccaattcaagattactcacctgactggcgacctgcataaaattgaacctaccgctaaa
ttcgccggcttccccgtcaatcaggcggttgaaatcccgatcaccggcgaatactggcag
ttatttgccactgactttatgccgcgttggtatgccacttcaggtgatgcgcagccaaaa
gtgctgaaaagcaccgatactgaggatattaatgaatatctgactcagtttacgggcgat
cagtggaagcgcactaaagacgacaataacgtgctgatgacgccggcatcccgttttgtt
aaaaacgaagcagtgaaaaggttggcagcagctaacctgcgcgggcagattatcccgacg
ccgatggaagtgaagattcaccaacaagatgctgatttgagtcaaggcgttgctcttgac
ctgagcgctttaccaaaaccagccgctgatgctgcacaacagcgttttgaattactgggt
ttgaagtcggattccgctggcttcccgattaaaacgctgattcaaccatctgcttttaaa
ggtgatttagccgtttctggtgcctatgagctgaaaatcggcgaaaaaggggcgcaagtc
ataggttttgaccctgctggggtgttctacggtttgcaatcgattctttctttagtgcca
gttgatggtagcaagaagattgcaacattggaggccaaagatgcgccgcgctttgaatat
cgtggtgtcttcctggatgtcgggcgtaacttcaaaaccaaagatgcggtactgcgttta
ctcgatcaaatggccgcttacaagctgaacaaattccatttccacctcagtgatgatgaa
ggctggcgtattgagatcccaggtttgccagaactgacggatgtcggtagcaaacgttgc
cacgatttaacggaaaccacctgtttattgccacaattgggttctggcccggatagcaat
aatctgggttccggccattttacccgcgctgattacatcgatattctcaaatacgccaag
gcgcgtcagattgatgtcattcctgaaattgatatgccagcccatgctcgtgcggctgtg
gtatcaatggaggcccgctacaacaatttgatgaagcagggcaaagaaaaagaagccaac
gaattccgtctggtcgacccgacagatgattctcaaacgacttcagttcagttgtatgag
cgcaaaagttatctcaacccatgtctggattcttctaagcgctttgtcgacaaagtgatc
ggcgaaatggctcagatgcataaagaagccggtatgccgctaaacacttggcattttggc
ggcgatgaggccaagaacatccgtctgggggccgggttccaggacaaaaatagcccgatt
gagccgggcaaaggcatcattgataagagtgttgaagataagccgtgggccaaatcacag
gtttgtcaggacatggtcaagcaaggaaaaattcaggatgttgagcatctttccagccac
ttcgccattgaagtcagcaagctggtgaatgcccatggcatcgaaaaaatgcaagcctgg
caagatggccttaaagatgccaaagattcgaaagattttgcgaccaaacgtgtgggcgtt
aacttctgggataccctctattggggcggggccgattcagtcaatgattgggccaataaa
ggctatgaagtggtcgcgtccaacccggactatgtctatttcgacatgccgtatgaagtt
aacccaaatgaacgcggttattactgggcaactcgcttcaacgacgaagccaaagtcttc
agtttcgcgccggataacatgccgcaaaatgctgaaacctcggtcgaccgcgacggtaat
cacttcagcgccaagagtgacaaaccttggccgggtgtgcagggtatttcaggccaatca
tggaatgaaactgttcggactgacgaacagatggaatacatgattttcccacgggtattg
ccgctggccgaacgtgcctggcatcgtgcgccatgggagcaagattaccaagcaggtcgc
gagtacaaaggtggcgaaacccatagggtcgatactaaggcgttgaactcagattggcag
cgttttgccaatattatgggacaacgtgaattggcgaaactggataaagccggtgttgct
taccgcttaccggttccgggggcgcgtgtcgttgcaggggagttggaagctaacatttcc
ttgccggggctgattatcgagtattccactgatggcggtaagcaatggcagaaatatgat
gtcaaagcccaacctaaagtcagcggtgacgtgttgattcgctcgacaagtccggatggt
aaacgtagtagccgggcagagccggttaaagtctga
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