Yersinia rochesterensis: CH54_356
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Entry
CH54_356 CDS
T03609
Symbol
nifJ
Name
(GenBank) ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00010
Glycolysis / Gluconeogenesis
ykr00020
Citrate cycle (TCA cycle)
ykr00620
Pyruvate metabolism
ykr00650
Butanoate metabolism
ykr01100
Metabolic pathways
ykr01110
Biosynthesis of secondary metabolites
ykr01120
Microbial metabolism in diverse environments
ykr01200
Carbon metabolism
ykr01210
2-Oxocarboxylic acid metabolism
Module
ykr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CH54_356 (nifJ)
00020 Citrate cycle (TCA cycle)
CH54_356 (nifJ)
00620 Pyruvate metabolism
CH54_356 (nifJ)
00650 Butanoate metabolism
CH54_356 (nifJ)
Enzymes [BR:
ykr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
CH54_356 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_10
Fer4
TPP_enzyme_C
Fer4_16
Fer4_6
Fer4_9
Fer4_21
Fer4_2
Fer4_8
Fer4_17
Fer4_4
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
AJJ35456
LinkDB
All DBs
Position
complement(368921..372454)
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AA seq
1177 aa
AA seq
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MITTDGNSAVASVAYRASEVIAIYPITPSSTMAEQADAWSGDGKVNIWGDVPRVVEMQSE
GGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTIATHALSIF
GDHSDVMAVRQTGCAMLCASSVQEAQDFALISQVATLNSRIPFIHFFDGFRTSHEINKIV
PLSDDTLRQLLPQKGIDGHRSRALSPDHPVVRGTSANPDTYFQSREATNPWYNNTYQHVA
DTMQAFAAATGREYKPFEYYGHPQAERVIILMGSAIGTCEEVIDSLLTRGEKVGVLKVRL
FRPFSAKHLLSVLPPSVTKIAVLDRTKEPGALAEPLYLDVMTALAEAYSRGERATLPKVI
GGRYGLSSKEFGPDCALAVFKELSVDLPRPRFTVGIFDDVTGLSLPLTDEKIEQRATLEA
LFYGLGSDGSVSATKNNIKIIGNSTSLYAQGYFVYDSKKAGGLTVSHLRVSKTPINSAYL
ISQADFVGCHQLQFIDTYQMAERLKPGGILLINTPFSADEMWQRLPQEVQAVLHQRKARL
FVINAAKIARECKLGARINTVMQMAFFHLTQILPTAMAQEQLRAAIDRSYSNKGPEIVTR
NWQALDATLDALVEIPLQPIDENSPMRPPIVSDQAPDFVKTVTATMLAGLGDALPVSAFP
PDGTWPVGTTQWEKRNIAEDIPIWQPDLCTQCNHCVAACPHSAIRAKVVQPDAMLGAPDS
LQSLDVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPEIKAINMQPRLAHLVEE
KAHYDFFLKLPEIDKTQMERIDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRLL
IANATGCSSIYGGNLPTTPYTTNADGRGPAWANSLFEDNAEFGLGFRLTVDQHRQRVTRL
INQLAPQLPQDLVGQLLNEDATPEVRREQVIQLRQLLKEIPGNDAQQLATDADYLVDKSI
WLIGGDGWAYDIGFGGLDHVLSLTENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHG
KRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAESYPGPSLIIAYSPCEEHGYD
LAYSHDQMKQLTATGFWPLYRFDPRRTDEGKVALALDSRPPNSDLTTTLLNEQRFRRLNT
QEPDVAARLYAEAEKDLKKRYDFLSLLAGKPDKTPTE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgattactactgacggtaacagtgcagtagcttctgtggcctatcgtgccagtgaagtt
attgctatctaccctattacgccaagctctaccatggccgaacaagctgatgcttggtct
ggcgatggcaaagtcaatatctggggggatgttccccgcgtagttgaaatgcagtctgaa
ggcggagccattgctactgtgcatggcgcactgcaaaccggcgcattatcgacctcgttt
acctcctcgcagggattactgttgatgatccccaccctctacaagctggcgggcgagctg
acaccttttgtcctccatgttgcggcccgcaccatcgcgacccacgcgctgtctatcttt
ggtgaccattctgatgtgatggcggtgcgccaaaccggttgcgcaatgctatgcgccagc
agcgtgcaagaagcacaagattttgctttgatttcccaagtggccacactcaatagccgc
atcccatttattcatttctttgatggattccgcacctcgcacgaaatcaataaaattgta
ccactcagcgatgacacactgcgccagctattgccacaaaaagggatagacggccaccgc
agccgggcgctttcgccagaccatccggtggttcgcggtacctccgctaacccggatacc
tatttccagtctcgcgaagcgaccaatccttggtataacaatacttaccaacatgttgcc
gataccatgcaggcttttgccgcggccaccgggcgcgaatataagccatttgaatattac
ggccacccacaggcggagcgcgttattattctgatggggtcagccattggcacttgtgaa
gaagtgattgatagcctgctcacgcgcggtgagaaagtcggcgtgttgaaagtgcggtta
ttccgtcctttctctgctaaacatcttctcagtgtcttgccgccatccgtgactaaaatt
gccgtattggaccgcaccaaagaacccggcgcactggccgaaccgctttatctcgatgtc
atgaccgcgctggcggaagcttatagccggggtgagcgggcaacattgccgaaagtgatc
ggcggccgctatgggctgtcctccaaagagtttggccccgactgtgcgctggcggtattc
aaagaattatctgttgacctgccgcgcccgcgctttaccgtggggatttttgatgacgtg
accggcctgtcattgccactcaccgatgagaaaatcgagcaacgtgccactttggaggcg
ctgttctacggccttggcagtgacggctcggtttcggcgaccaaaaataatattaagatt
atcggcaacagcacctcactgtatgcgcaaggctattttgtctacgactcgaaaaaggcc
ggtggcctgacggtctctcacttgcgagtcagcaaaacgccgattaactcagcctatctc
atcagccaggccgattttgtcggctgtcaccagttacagtttattgatacttatcaaatg
gctgagcgcttaaaaccgggggggattctcttaattaacaccccgttcagtgcggatgaa
atgtggcagcgcctgccgcaagaagttcaggcggtactgcaccagcgcaaagcccgctta
tttgtgattaatgcggcaaaaattgcccgcgaatgcaaactgggcgcgcgtattaatacc
gtcatgcagatggcgttcttccatctgacgcaaatcttgcccaccgccatggcgcaggaa
caattacgggcggccattgaccgcagctacagtaataaagggccggaaattgttacccgc
aactggcaagcgctggatgctaccctggatgcattagtcgaaattccattgcaaccgatt
gatgaaaatagcccgatgcgcccaccgattgtctctgatcaagcgcccgatttcgttaaa
accgtcaccgccaccatgctggccggtttgggcgatgccctgcccgtttcggccttccca
cctgatggcacctggccggtgggcaccacccagtgggaaaaacgcaatattgctgaagat
attcctatctggcagccggatctgtgtacccagtgtaaccactgcgttgctgcttgcccg
cactcggccattcgcgccaaagtagtacagccggatgctatgttgggtgcgccagacagc
ttacaatcgctggatgtcaaagcccgtgatatgcgggggcagaaatatgtattgcaagtc
gccccagaggattgcaccggatgtaatctttgttatgaagtctgcccggcgaaagatcgg
cagaacccagaaatcaaagccatcaatatgcagccacggctggcacatctggtggaagaa
aaagcgcactatgatttcttcctcaaactgccggaaatcgataaaacgcaaatggagcgt
attgatatccgaacttcacagctgatttcgccgctgtttgaatattccggtgcttgctcc
ggttgtggagaaacaccgtatattaaattactgactcagttgtatggcgatcgtctgttg
attgctaacgccaccggttgctcctcaatctatggtggcaacctgcccacgacgccgtat
accaccaacgcggatggccgtggcccagcttgggctaactcactgttcgaggataatgcc
gagtttggtctgggcttccgtctgacggttgaccaacatcgccaacgtgtcactcgcttg
ataaaccagttagctccacagttgccgcaggatttggttgggcaattactcaatgaggat
gcaacacccgaagtccgccgtgaacaagtcatccaactgcgccagctattaaaagagatt
ccgggcaatgatgcccaacaattagccacggatgcagattatctggtcgataaatctatc
tggctgattggcggcgacggctgggcctatgatattggctttggtggtttagaccatgta
ctcagcttgaccgaaaacgtcaatgtgctggtactggatacccaatgttactccaatacc
ggtggtcagcaatccaaagccaccccgctgggggcggtgaccaagtttggtgagcacggc
aaacgtaaggcacgcaaagatttgggtgttagcatgatgatgtacggccatgtctatgtc
gcgcaaatttcgttaggtgcgcagcttaatcaaacggttaaagctattcaggaagccgaa
tcctaccccggcccatcattgattattgcctatagcccttgtgaagagcacggttatgac
ttggcctacagccatgatcaaatgaagcaattaaccgccaccggtttctggccactgtat
cgttttgacccacgccgtaccgacgagggcaaagtggccttagcactggattcccgccca
ccaaacagcgatttgaccaccacattactcaatgagcagcgcttccggcggctcaacaca
caagagccagatgtggcggcgcggttgtatgctgaggctgaaaaagacctgaaaaaacgc
tatgacttccttagcttgttagccggaaaaccggataaaacgccgaccgaataa
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