Yarrowia lipolytica: YALI0F18238g
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Entry
YALI0F18238g CDS
T01033
Name
(RefSeq) YALI0F18238p
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
yli
Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yli03009
]
YALI0F18238g
Enzymes [BR:
yli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YALI0F18238g
Ribosome biogenesis [BR:
yli03009
]
Eukaryotic type
Pre-60S particles
Helicases
YALI0F18238g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
TipAS
Motif
Other DBs
NCBI-GeneID:
2908671
NCBI-ProteinID:
XP_505569
UniProt:
Q6C193
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All DBs
Position
F:2422802..2424682
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AA seq
626 aa
AA seq
DB search
MSTDWKDLPVAPWLIDTMEQFGFTDMTPVQASVIPMFAGNKDVIVEAVTGSGKTIAFLVP
LIQRMLNLLKEGPAVSGRVYSVVVSPTRELARQTYEVLQSILEMGCPEADASDKITLEKK
KKGKAAPTMPKKIRGQLIMGGDLPSHMDLKNFLRDKPQIIVATPGRLLELLRAPQIKTSA
FDSLVLDEADRLLDLGFGRDITSIINILPKQRRTGLFSATITDAIQNLVKIGLRNPVKIV
VKVGGKKEQKTPLSLGLSYVVLEPREKLAYALNLLSIYPYRKAIVYLPTCAAVTYYQQMF
SHLNEGREEPYEIYGLHGKLPSSTRIKILNKYQKTGAQAILMTTDIAARGLDIPEVDLVV
QLDPPSDADTFQHRCGRAGRAGRQGQAIVLLHKGREEEYVDLMRVRKVKLRPYTGPGSEL
EGEKLDQEATELYTKLRKWVLEDRQRHDQALLSFVSFVRFYSKHVAQSIFRIQSLDLPGL
AASYGLLRLPKMPELRTKDNERPENTWLGEVIDFDTYSYKNPAKEEARLKELEAHKEAMK
NKVKIHKTKNDVQKANRAWSSTLQKKEEKSERHQKKQTRINEKIKRDFEEAKDLKQEESK
EVVNDWKDMVKKSKKRKVDLPTFDDL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgactggaaagacttgcccgttgcgccatggctgatcgacaccatggagcag
ttcggattcaccgatatgacccctgtccaagcttcagtcatccccatgtttgcaggaaac
aaggacgtgattgtcgaggcagtcactggctcaggaaagaccattgccttcctagttcct
ctgatccagcgaatgctgaatctgctgaaggaaggaccggctgtttctggccgagtgtac
tctgtggtcgtctctcctacccgggaacttgcccgacagacatatgaagtgctgcagtcc
attctggagatgggatgtcctgaagccgatgctagcgacaaaatcaccctggagaagaag
aagaagggaaaggccgcccccaccatgcccaagaagatccgaggccagctgatcatgggt
ggagatcttccatctcatatggatctgaagaacttccttagagacaagcctcagatcatt
gttgccactcctggccgattgctcgagctgttgcgtgctccccaaatcaagacatccgca
tttgactctctggtcctggacgaggccgaccggcttctcgacctcggctttggacgagac
attacatccatcatcaacattctccccaaacagcgaagaacaggacttttctctgctaca
atcacagacgccatccagaacctggtcaaaattggtctacgaaatcccgtcaagattgtc
gtcaaggttggcggtaagaaggaacagaagaccccgctttcgctgggtctctcttacgtt
gttctggagcctcgcgagaagctggcctacgctctcaatctgctcagtatctacccctac
agaaaggccattgtttacttgcccacatgtgcagctgtgacatactaccagcaaatgttt
tcacatctcaacgagggcagggaagaaccctatgagatctacggtcttcatggaaaactg
ccatcatctactcgaatcaagattctcaacaagtaccaaaagactggagcgcaagccatc
ttgatgactacagatatcgctgccagaggtcttgatattcccgaggttgatcttgttgtc
cagcttgatcctccttctgatgctgacaccttccagcatcgatgtggacgagccggtcga
gctggaagacagggccaggctattgtacttttgcataagggacgagaggaggaatacgtg
gacctcatgagagtccgaaaggtgaagctgcgaccatacaccggacctgggtcggagctg
gaaggagagaaactggatcaggaggctacggaactgtacaccaagctgagaaagtgggtg
ctcgaagacagacaacgccatgaccaggctcttctttcgtttgtgtcctttgtccggttc
tactccaagcatgttgcccagtccattttccgaatccagtcactggatctgcctgggctg
gcagcctcttacggcctgttgcgcctgcctaagatgcctgagctgcgaaccaaggacaac
gagagacctgaaaacacatggctgggcgaggtgattgacttcgacacatactcgtacaag
aaccccgccaaggaggaggcccgactcaaggagctggaggcacacaaggaagccatgaag
aacaaggtcaagatccacaagaccaagaacgacgtccagaaggccaaccgagcctggtcc
tccacgcttcagaagaaggaggagaagtctgagcgtcaccagaagaagcagacacgtatc
aacgagaaaatcaagcgggactttgaggaggccaaagatctcaagcaggaggagtccaag
gaggttgttaacgactggaaggacatggtcaagaagagcaagaagcgcaaggtcgatctg
cctacctttgacgacctgtaa
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