Yarrowia lipolytica: YALI0F30173g
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Entry
YALI0F30173g CDS
T01033
Name
(RefSeq) YALI0F30173p
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
yli
Yarrowia lipolytica
Pathway
yli03022
Basal transcription factors
yli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
YALI0F30173g
09124 Replication and repair
03420 Nucleotide excision repair
YALI0F30173g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yli03021
]
YALI0F30173g
03400 DNA repair and recombination proteins [BR:
yli03400
]
YALI0F30173g
Transcription machinery [BR:
yli03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
YALI0F30173g
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
YALI0F30173g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
2908598
NCBI-ProteinID:
XP_506038
UniProt:
Q6BZX4
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All DBs
Position
F:3774940..3776343
Genome browser
AA seq
467 aa
AA seq
DB search
MTSQFKNSINDYLEGLPEAVLTRLYQSPATCLAVFRLLPALARTLIMGMIFNPDPIAVAD
VDALVKPSSQRLKLETQKKLRLLHIFTETQAHIIINPTFKKNLRAALVGGDQNISFGVPC
DTEDKHKVDVAFLDAHAVSQWEMILHFMVGTSIGRTPSDGVLNLLKHSGLMEPERGGLRI
TNAGFQFLLQDVNAQIWTLLLQYLNMSEYLQMDPVDVLNFIFMLGSLELGQDYSLSALSE
TQKHMLEDLRDYGIVYQRKASSRRFYPTRLATTLTSETAALRTASQSMEAATQDTISSSV
AADSGFIILETNFRLYAYTESPLQIAVLNLFVNLKTRFANMVTGQINRDSVRFALSNGIT
AEQIITYLSVHAHPRMKGMEHVLPPTVVDQIKLWQLEMDRIRATDGYLFSEFKNFDEYKD
VSTYAKELGVLLYENPGKRKFVSTLAGSQQIVEFVKRRNQKHRSSAN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccagttcaaaaacagcatcaatgactacctggaaggtcttccggaggcagta
ctaactcggctgtaccagtctccggccacatgtctggcggtgttccgactgctacctgct
ctggcaagaacactcatcatgggcatgattttcaaccccgatcccatagcagtagccgac
gtcgacgctctggtgaagccttcaagtcagcgactcaagctcgaaacacagaagaaactg
cgactgctccacattttcacagagacccaggcccatatcatcattaatccgacattcaaa
aagaacctgagggcagctctggtaggaggagaccagaacatttcgtttggagtgccctgc
gacacggaagacaaacacaaggtggatgtggcgtttttggatgctcacgctgtctctcaa
tgggagatgatcttacattttatggtcggaacgtcgattggaagaacacccagtgatgga
gtgctcaacctgctgaagcacagtggacttatggaacccgaacggggaggactgagaatc
accaatgcaggattccagttcttgctacaggatgtaaatgctcagatttggacactgttg
ctccagtatctcaacatgtccgagtatctgcagatggatcctgtagacgtgctcaacttc
attttcatgctaggttctctcgagctaggccaggactactcgctcagtgcactctccgag
acacagaaacacatgctggaggatctgcgggattacggtatcgtctaccagcgaaaagca
tcgtctagacgattctatcctacgcgactggctactactctgacatcagaaacggctgca
cttagaacagccagtcagagcatggaagcagctacacaagacacaatttcgtcttctgtt
gctgccgactctggatttatcattctggaaactaatttcagactctacgcctacacagag
tctccactacagatcgcagtactgaacctttttgtcaatcttaagacacgatttgcaaac
atggttaccggtcagatcaaccgagactcggttcgatttgcgctctcaaacggtattact
gccgaacaaatcatcacatatctctctgttcatgcacacccacgtatgaaggggatggaa
cacgttcttccccctactgtggtggatcagatcaaactgtggcaacttgagatggacaga
atccgagccaccgacggttacttgttctccgagttcaaaaactttgacgagtacaaggat
gtctccacttatgccaaggagctgggcgttctcttgtatgagaatcctggaaagcgaaag
ttcgtgtctacgcttgctggttctcagcagattgttgagtttgtcaaacgacgaaatcaa
aagcaccgtagctccgcaaactga
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