Yersinia mollaretii: HRD69_18470
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Entry
HRD69_18470 CDS
T06716
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
ymo
Yersinia mollaretii
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ymo03400
]
HRD69_18470
DNA repair and recombination proteins [BR:
ymo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HRD69_18470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
zf-ribbon_3
AAA_30
AAA_22
zinc_ribbon_2
AAA_16
UPF0547
SLFN-g3_helicase
AAA
DZR
Motif
Other DBs
NCBI-ProteinID:
QKJ04816
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Position
4161460..4163217
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AA seq
585 aa
AA seq
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MAFTLRPYQQEAVDATLAHFRRHTDPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYDLEADIFAAGLQQRQSEGKVVFGSVQSVARNLPLFDSAFSLLIIDECH
RISDEDDSQYQQIIQHLRTTNPRLRLLGLTATPYRLGKGWIYQFHYHGITRGDEKALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGMFREADLDRELKQQQRITPH
IVSQIMEYAAQRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPAERDALITAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKEDCLILDYAGNP
HDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTESGQIIEHYGRRCQGWFEDDQG
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGMS
LETGRDAKGEWLKITYYDEDGTNTSERFRLTTAAQRMAFEQIFLRPHQRAPGIALKWQTA
ADIIAQQALLRYPDFVVARQRGQWWQIREKVFDYQGRFRRADPLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttacgctacgcccataccagcaagaggcggtggatgccaccctcgcccacttt
cgtcgccacaccgacccggcactgattgtcttgcccacgggggcgggtaaaagtttggtt
atcgccgaattagcgaaactggcccgtggtcgtgtactggttttggcgcatgtcaaagag
ttggtggcgcagaatcacgccaaatactgcgcctacgatttagaggccgatattttcgcc
gccgggctacaacagcgccaaagtgaaggcaaagtagtgtttggcagtgtgcagtctgtg
gcacgtaatctcccgctatttgatagcgcattttcgctgctgattattgatgaatgccat
cgcatcagtgacgaagatgacagccaatatcagcaaattatccagcatttacgcaccacc
aacccccggctacgtctgttggggctgacagcaaccccctatcggctgggcaaaggctgg
atttatcaattccactatcacggcattacccgtggtgatgaaaaagcgctgttccgcgat
tgcatctatgaattaccgctgcgttacatgatcaagcacggttttctggtgccaccggag
cggctggatatgccggtggtgcaatatgatttcagccgtctgaccagcaacagcgacggt
atgttccgtgaagcggatctcgatcgagagcttaaacagcagcaacgcatcaccccgcat
atcgttagccagataatggagtacgccgcccaacgccgtggggtgatgatttttgcggcc
actgttgagcacgccaaagaggtgtacggattgctgcccaaaggcgaggccgcgttagtg
agtgctggcactccccccgccgaacgggatgccctcatcaccgcatttaagcagcaacaa
ctgcgctatctggtcaatgtcgccgtgctgaccacgggctttgatgcacctcacgtggat
ctgattgcgattctgcgccccaccgagtcggtcagtttgtatcagcagattgtcggtcgg
ggcttgcggctctcaccgggtaaagaagattgcctaattctggattatgccgggaatccc
cacgatctttttacccccgaagtgggtaccagcaaaccccatagcggcagccagccagtg
caggtcttttgcccagattgcggcttcgccaatattttctgggggaaatgcaccgagtct
gggcagatcattgagcactatggccgccgctgtcagggctggtttgaggatgatcaaggg
gcgcgagcgcaatgtgactaccgcttccgctttaagtcttgcccgcattgcggggcagaa
aatgatattgccgcgcgccgctgtcatcagtgtcaggaagtgctggttgatcctgatgac
atgctgaaagctgcgctaaaattgaaagatgcgctggtgctacgttgcggcggaatgagt
ctggaaacgggccgtgatgctaaaggcgagtggctgaaaatcacctattacgatgaagac
ggcaccaataccagcgagcgttttcgcttaaccacagccgcgcagcgtatggcatttgag
caaattttcctgcgccctcatcagcgcgcaccgggtattgcgctaaaatggcaaacggca
gccgatatcatcgcgcaacaagcgttgttacgttaccccgattttgtcgtcgcccgccaa
cgtgggcaatggtggcaaatcagggaaaaggtatttgattatcagggccgttttcggcgg
gcggatcccctagcttaa
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