Yersinia pestis D106004: YPD4_3396
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Entry
YPD4_3396 CDS
T01832
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthetase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd00860
Porphyrin metabolism
ypd01100
Metabolic pathways
ypd01110
Biosynthesis of secondary metabolites
ypd01120
Microbial metabolism in diverse environments
ypd01240
Biosynthesis of cofactors
Module
ypd_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
YPD4_3396 (hemD)
Enzymes [BR:
ypd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
YPD4_3396 (hemD)
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Ortholog
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GFIT
Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
ACY60300
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All DBs
Position
4307425..4308174
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AA seq
249 aa
AA seq
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MTILVTRPSPAGEQLVTRLRALGRVAYHAPLIDFSPGRDLPKLPELLQDMQAGDLVFALS
QNAVRYANPLLKRNKLSWPVQLSYYAIGRTTALALHTASRLHVTFPPMGETSEMLLSLPL
LQNLAGKKALLLRGNGGRELLGASLAERGAAVTFCECYQRSPIYYDGSEQSAHWQRAGVD
ILVVTSGEMLQQIYTLVPDYYRSSWLLRCRLIVVSDRLAALATQMGWTEVRVAENADNDA
LIRALQDLQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcctggtcacccgtccatcccctgctggggagcaattagtcactcgcctgcgt
gctctgggccgggttgcctaccatgcgccattgattgatttttccccaggaagagacctg
cccaaactgccggaattattgcaagatatgcaagcgggagacttggtttttgctttatca
cagaacgcggtccgctacgctaacccgctgttaaaaagaaataaactgtcatggcctgtg
cagttatcttattatgctattggccgtacaaccgcattagcactgcataccgccagccgt
ttgcatgtcactttcccaccaatgggggagaccagtgaaatgctgctatcattgcccctg
ctgcaaaatttggccggtaaaaaggcactgttattacgcggtaatgggggccgggagttg
ctaggcgcaagcctcgcagaacgcggagcggccgtgaccttctgcgaatgctatcaacgc
agtcccatctattatgatggcagcgaacaaagtgctcactggcaacgtgccggtgttgat
attctggtggtcaccagcggcgaaatgttacaacagatctatactttagttcctgattac
tatcgttcttcctggttactgcgttgccgtttaatcgttgtgagtgatcgtttagcggcc
ttagccacccaaatggggtggacggaggtccgggtagcagaaaatgccgataatgacgca
ctgatccgtgcgttacaagaccttcaataa
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