Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_2719
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Entry
YpsIP31758_2719 CDS
T00570
Name
(GenBank) putative helicase
KO
K19789
DNA repair protein RadD
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypi03400
]
YpsIP31758_2719
DNA repair and recombination proteins [BR:
ypi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
YpsIP31758_2719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
zf-ribbon_3
AAA_30
zinc_ribbon_2
AAA_22
UPF0547
SLFN-g3_helicase
AAA_16
AAA
DZR
zf-RanBP
Motif
Other DBs
NCBI-ProteinID:
ABS48087
UniProt:
A0A0U1QZ81
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All DBs
Position
3073674..3075431
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AA seq
585 aa
AA seq
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MAFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLPLFDSAFSLLIIDECH
RISDEDDSQYQQIIQHLRTGNPQLRLLGLTATPYRLGKGWIYQFHYHGITRGDEKALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPH
IVSQIIEYAAQRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPAERDALINAFKQQQ
LRYLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLFPGKEDCLILDYAGNP
HDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWFEDDQG
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQAVLVDPDDMLKAALKLKDALVLRCGGMQ
LETGQDAKGEWLKATYYDEDGTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTA
ADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYKGRFRRADALA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcacactacggccttatcaacgagaagcggtcgatgccacggtggcttatttt
cgacgccacaccacacccgcactcattgttctaccaaccggcgcaggcaagagtttagtg
atcgcagaacttgcgaaactggcccgtggccgtgtgttggtcttagcgcatgtcaaagag
ttggtggcacagaatcacgcaaaatactgcgcatacggtcttgaggccgatatctttgcc
gccgggttgcaacagcgacaaagcgagggaaaagtggtctttggcagcgtgcaatcggtg
gcccgtaatctgccgctatttgatagcgcattttctctgctgattatcgatgaatgtcat
cgtatcagcgatgaagatgacagccagtatcagcaaatcattcagcatttacgcacgggg
aatccgcagttacggctgttggggctgacggccaccccttatcggctggggaaaggctgg
atttatcagttccactatcacggtattactcgtggtgatgaaaaagccctgttccgtgac
tgtatttatgaattaccgctgcgttatatgattaaacatggctttctggtgccacctgaa
cggctggacatgccggtcgtacagtatgatttcagccgcctgaccagcaacagtgatggc
ttgttccgtgaggcagatttagatcgagaacttaagcaacaacaaagaattaccccacat
attgttagccaaataatcgaatatgcggctcagcgtcgcggtgtgatgatttttgccgcc
accgtagagcacgccaaagaagtctatggcctgttgcccaaaggtgaagccgcgttggtc
agcgcggggaccccacctgcggaacgggatgcgctgatcaatgcctttaaacagcaacaa
ttgcgctatttggtcaatgtgtcggtactgaccaccggttttgatgccccccatgtggat
ctgattgccattcttcgtccaaccgaatccatcagtttatatcaacaaattgttggccga
ggcctgcggctgtttcccggtaaagaggattgcttgattctggattatgcgggtaatccc
catgaccttttcacgccagaagtgggcacgagcaaacctcacagcgggagccaaccagta
caagtcttctgccccgattgtggttttgccaatatcttctgggggaaatgcactgagtcc
ggcgaaataattgagcactatggccgccgctgtcagggctggtttgaggatgatcagggt
gcacgtgcgcaatgtgactaccgttttcgctttaaatcctgcccacattgcggagcagaa
aatgatattgccgcccgtcgctgccatcaatgccaggcggttttggtcgatcccgacgat
atgctgaaagccgccctgaaactgaaagatgcgctggtattgcgctgtggcggtatgcag
ctagaaacgggccaagacgccaaaggcgagtggctgaaagcgacctattacgatgaggat
ggcaccaataccagtgagcgcttcagattaaccacacctgcacaacgtatggcattcgaa
cagatattcctgcgccctcaccagcgcgcaccgggcattgcccttaaatggcacaccgcc
gctgatattatcgcgcagcaggcgttgctacgttatccggattttgtggtcgcccgccgt
cgggggcagtggtggcaaatcagggagaaggtatttgattacaaggggcgttttcggcgg
gccgatgcccttgcctga
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