Yersinia pestis KIM10+ (biovar Mediaevalis): y0745
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Entry
y0745 CDS
T00092
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk03030
DNA replication
ypk03430
Mismatch repair
ypk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
y0745 (holC)
03430 Mismatch repair
y0745 (holC)
03440 Homologous recombination
y0745 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypk03032
]
y0745 (holC)
03400 DNA repair and recombination proteins [BR:
ypk03400
]
y0745 (holC)
Enzymes [BR:
ypk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
y0745 (holC)
DNA replication proteins [BR:
ypk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
y0745 (holC)
DNA repair and recombination proteins [BR:
ypk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
y0745 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AAM84331
UniProt:
Q8D1C1
LinkDB
All DBs
Position
complement(830245..830721)
Genome browser
AA seq
158 aa
AA seq
DB search
MCPLRCREFMKNATFYLLEHDTPAGELRAHEALACEIAAERWRAGKRVLIACESQEQAQR
LDEALWQRAPEQFVPHNLAGEGPKYGAPVELAWPERRGNSPRDLLISLLPEFAGFATAFH
EVVDFVPYEENLKQLARDRYKSYRSVGFHLTTATPPTN
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
ttgtgccctttacgttgtagagaatttatgaaaaacgctaccttctacctgctcgaacac
gacacgcctgccggtgagctgcgagcgcacgaagcgttggcctgcgagatcgcggctgaa
cgttggcgtgcgggcaagcgggtgttgatcgcctgtgaaagccaggaacaagctcagcgg
ctggatgaagcgctctggcagcgcgctcctgaacaatttgtgccacataatctggccggt
gaagggccaaaatatggcgctcccgtcgaactggcgtggccggaaagacgcgggaattca
ccgcgcgacctgcttatcagcctgctgccagaattcgcaggttttgccaccgctttccat
gaagtggtagacttcgtgccttatgaagaaaatttgaaacagttggcgcgcgaccgatat
aaatcttatcgcagcgtcggcttccacttgaccacggcaacgccgccaactaattga
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