Yersinia pestis El Dorado: CH46_1608
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Entry
CH46_1608 CDS
T03719
Name
(GenBank) RND transporter, hydrophobe/amphiphile efflux-1 family protein
KO
K18138
multidrug efflux pump
Organism
ypl
Yersinia pestis El Dorado
Pathway
ypl01501
beta-Lactam resistance
ypl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ypl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH46_1608
01503 Cationic antimicrobial peptide (CAMP) resistance
CH46_1608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypl02000
]
CH46_1608
01504 Antimicrobial resistance genes [BR:
ypl01504
]
CH46_1608
Transporters [BR:
ypl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CH46_1608
Antimicrobial resistance genes [BR:
ypl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CH46_1608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
DUF4232
Mfp-3
Motif
Other DBs
NCBI-ProteinID:
AJJ14689
UniProt:
A0A3G5L880
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All DBs
Position
1771221..1774346
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AA seq
1041 aa
AA seq
DB search
MFARFFIYRPVFAWVIAIVIMLGGVVALETLPIAQYPDVAPPSISIKATYTGASAETLEN
SVTQVIEQELTGLDGLLYFSSSSGSDGNAKIVATFKQGTNADTAQVQVQNKVQQALTRLP
TEVQAQGVTVTKSQTNFLLIMSLYDEKDKHTGTDIADYLVSNLQDPLARLEGVGSVQVFG
SQYAMRIWLNPTKLAAYNLMPSDVQSAITAQNTQVSAGKIGALPSGKEQQLTATVMAQSR
LKTPEQFNNIIVKSDSTGAVVRLRDVARVELGNEDYSVTTRLNGHPAAGIAVMLAPGANA
LATAERVKAKAAEFELNLPDGYKIAYPKDSTDFIKVSVEEVVKTLIEAILLVVIVMYIFL
QNIRATLIPAIAVPVVLLGTFGVLAIFGYSINTLTLFGMVLSIGLLVDDAIVVVENVERV
MREDNLPPREATEKSMSEIASALIGIALVLSAVFLPMAFFGGATGVIYRQFSITIVSAMA
LSVLVALTLTPALCATFLKPNHKPPSEHGFFGGFNRRYDRMQTRYESLVGHVIHRSLRYL
LIYAVLIGVMCVLFIRLPTGFLPTEDQGDVMVQYTLPAGATSGRTMEVSKAVENYFMTQE
KDNTKAVFTISGFGFSGSGQNAGMAFIALKHWRDRPGSENTATAIADRAMKALSSIRDAQ
IFSMTPPAVDGLGQSNGFTFELQATGDTSREQLLTLRDQLISKANKDPILASVRANTLQQ
MPQLQVDIDNDKVAALGLSISDVNATLSAAWGGTYINDFIDRGRVKKVYMQGDVDTRSKP
EDLNQWFVRGSSDAMTSFSAFATTRWIYGPETLSRYNGQTSYEIQGQAASGSSSGTAMDQ
MEKLAAELPGTSYAWSGLSYQERLASGQALSLYAISILVVFLCLAALYESWSVPFSVMMV
IPLGIIGAVAAATLRGLENDIYFQVALLTTLGLASKNAILIVEFAEAAYLRGEPLVVAAL
QGAATRLRPILMTSLAFIAGVMPLAMSTGAGANSRISIGSGIIGGTLTATVLAVFFVPLF
FVLIRRVFSGKSKNITEHKGV
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccgtttctttatttatcgcccggtttttgcctgggtcattgccattgttatt
atgttgggcggggtggttgcgctggaaaccttgccgatagcccagtatcccgatgtcgca
ccaccatctatttccattaaagccacctataccggtgcttcagcagaaacactcgaaaac
agtgtgacgcaggtcattgagcaagaactgaccggattggatggtctgctctatttttcc
tcctccagcggttccgatggtaatgccaagatcgtcgccacatttaagcaggggactaat
gctgataccgcgcaggtacaggtgcaaaataaggttcagcaggcgctaacccgtttgcca
acagaggtgcaggcgcaaggggtcacggtgaccaagtcgcagactaacttcttgttgatc
atgtcgctgtatgatgaaaaagacaaacacaccggaacggatattgccgactatctggtc
agcaacctgcaagacccactggctcgcctcgaaggggtagggagtgtgcaggtgtttggt
tcgcaatatgcgatgcggatttggttaaatccgaccaaactggccgcttacaatctgatg
cccagcgatgttcaatccgccattacggcacagaacacacaggtttctgctggcaaaatc
ggggcgttaccgagcggtaaagagcagcaattgaccgcgacagtcatggcgcaatcccgc
ctgaaaacaccggagcagttcaacaatattattgttaaaagtgacagcacgggcgcggtg
gtacgactgcgcgatgtggcccgtgttgagctgggcaatgaagattacagcgtgacgacc
cgcttgaacggccatccagccgcggggatcgcggtgatgctggcacctggtgctaatgcg
ctggcgaccgccgagcgggtaaaggccaaggctgccgagtttgaattgaacttgcctgac
ggatacaaaatcgcgtatccaaaagacagcactgattttattaaagtttcggtcgaggaa
gtggtgaaaacgctgatcgaagccatcttgctggtggttatcgtgatgtacatcttccta
caaaatatccgtgccactttgataccggctattgccgtcccagttgtgttgttagggacg
tttggggtgttggccatattcggctactcaatcaatacactgacactttttggtatggtg
ctgtcgatcggcttgttggtcgacgatgctattgtcgtggtggaaaacgttgagcgggtg
atgcgggaagacaatctcccgccccgtgaagcgactgagaaatctatgagtgagatcgcc
agcgcactgattgggattgcactggtgctctcggcagtattcctgcccatggccttcttt
ggtggggcgaccggcgttatctaccgccagttctccatcaccattgtgtcagcgatggcg
ctatccgtgttggtcgcattaaccctcacgccagcattgtgcgccaccttcctgaaaccc
aaccataaaccgccatcagagcacggtttcttcggcgggttcaaccgtcgctatgaccgg
atgcagacccgttatgaaagcctggtagggcatgttattcaccgctctttgcgctattta
ctgatttacgccgtgctgattggggtgatgtgtgtgttgtttattcgcctgccaacgggc
tttttaccgaccgaagatcagggtgatgtcatggtgcaatataccttgccagcaggggca
accagtgggcgcaccatggaggtcagtaaggcggtagaaaactatttcatgacgcaggaa
aaggacaataccaaagcggtcttcactatctccggttttggctttagtggtagcgggcaa
aatgccggtatggcgtttattgcattgaaacactggcgtgaccggccgggcagtgaaaat
accgccacagccattgcagatcgcgcgatgaaggcactgtcgagtattcgcgatgcccaa
attttcagtatgacgccacctgcggtggatgggttaggccagtcgaatggctttactttt
gagttgcaagccacaggggataccagccgcgagcaactgctgaccttgcgcgatcaactg
attagcaaggcgaataaagaccctattttggcctcagttcgcgccaataccttgcaacaa
atgccgcagttacaagtagatatcgataacgataaagtcgcggcattagggctgtcgatc
agtgatgtgaatgccacattaagtgccgcctggggtgggacgtatatcaatgactttatt
gatcgtgggagagtgaaaaaagtgtatatgcagggtgatgtggatacccgctctaaaccg
gaggatctcaaccaatggttcgtgcgcggtagcagtgatgccatgacatcgttttctgcc
tttgcgacaactcgctggatttacggcccggaaacgctttcccgctataacgggcagacg
tcctatgaaattcaggggcaggccgcttccggcagcagttcgggcaccgcaatggatcaa
atggagaaactggcggctgaattacctggcaccagttatgcgtggagcgggctgtcttat
caggagcgtttagccagcgggcaagcattatcgctgtatgccatttcaatcttggtggta
ttcctgtgcttggcggcgttgtatgagagttggtcagtcccgttctcggtcatgatggtt
attccgttggggataatcggtgcagtagcggcagcgacgctgcggggattggaaaatgat
atttacttccaggtggcgttgttgacgaccctgggtctggcatcgaaaaacgccattctg
attgttgaatttgccgaagcggcctatttacgcggcgaaccgctggtggtggcggcgttg
cagggcgctgcaactcgcttacggcctatcctgatgacatcgctggcatttattgctggg
gtaatgcctctggcaatgtctaccggtgccggtgctaacagccgcatttcaatcggcagc
ggcattattggcggcaccttaacggcgacagtgttggccgtcttttttgtcccgctcttt
tttgtcttgattcgtcgagtgttcagcggcaagtcaaaaaatatcactgaacataaagga
gtataa
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