Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0261
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Entry
YPDSF_0261 CDS
T00505
Name
(GenBank) hypothetical protein
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypp03016
]
YPDSF_0261
Transfer RNA biogenesis [BR:
ypp03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
YPDSF_0261
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Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
His_biosynth
NMO
NanE
PEP_mutase
Pterin_bind
DUF6207
Motif
Other DBs
NCBI-ProteinID:
ABP38680
LinkDB
All DBs
Position
complement(289328..290293)
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AA seq
321 aa
AA seq
DB search
MRIGHFQLTNCLIAAPMAGITDRPFRALCHGMGAGMAVSEMLSSNPEVWRTDKSRLRMVH
VDEPGIRNVQIAGNDPDEMAAAARINVASGAQIIDINMGCPAKKVNRKLAGSALLQHPDL
VKQILSAVVNAVDVPVTLKIRTGWSPEHRNCIEIAQLAENCGIQALTIHGRTRSCLFNGE
AEYDSIRAVKQTVSIPVIANGDITDPHKARAVLDYTGADALMIGRAAQGRPWIFREIQHY
LDTGELLPPMPLGEVQRLLDGHIRELHDFYGPGKGFRIARKHVSWYLQEHAPNDQFRRTF
NAIEDASEQLEALEAYFENLA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattggacacttccagcttacaaattgcctgattgccgccccgatggcgggtatc
acagatcgccccttcagagcgctatgtcatggtatgggggctgggatggctgtatctgaa
atgctctcctctaatccagaggtttggcgaacggataagtcgcgtttacgcatggtccat
gttgatgaacccgggattcgtaacgtgcaaattgccggtaacgatccagatgagatggca
gcagccgccagaatcaatgtggcgagtggtgcccaaatcatcgatatcaatatgggatgt
ccagccaagaaagtgaaccgcaaactggcgggttctgcattattgcagcatcctgatctg
gtcaaacagatcctctccgcagtggttaatgcggtagatgtgccggtgacgttgaagatc
cggacgggttggtcaccagaacaccgtaactgtatagaaattgcccaactggccgaaaat
tgtggtatacaagccctgacgattcatggccgaacccgttcttgcctgtttaatggtgag
gcggaatacgacagtattcgagcagttaagcagactgtttccattcccgttatcgcgaat
ggtgacatcactgacccgcataaagccagagcggtactcgactacactggagctgatgct
ctgatgataggccgtgccgctcagggaagaccgtggatcttccgggaaatccagcattat
ctggacactggggaactgctgccaccgatgccacttggcgaagtgcagcgtttgttagac
gggcatatacgggaattgcacgacttttatggtccaggcaagggatttcgtattgcacgt
aagcacgtctcttggtatctccaagagcacgcccctaacgaccagtttcggcgcacattc
aacgccattgaggatgccagcgaacagctggaggcgttggaggcatatttcgaaaatctt
gcgtaa
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