Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3108
Help
Entry
YPDSF_3108 CDS
T00505
Name
(GenBank) 3-isopropylmalate dehydratase, large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00290
Valine, leucine and isoleucine biosynthesis
ypp00660
C5-Branched dibasic acid metabolism
ypp01100
Metabolic pathways
ypp01110
Biosynthesis of secondary metabolites
ypp01210
2-Oxocarboxylic acid metabolism
ypp01230
Biosynthesis of amino acids
Module
ypp_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
YPDSF_3108
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
YPDSF_3108
Enzymes [BR:
ypp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
YPDSF_3108
4.2.1.35 (R)-2-methylmalate dehydratase
YPDSF_3108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Nodulin
Motif
Other DBs
NCBI-ProteinID:
ABP41466
UniProt:
A4TQA4
LinkDB
All DBs
Position
3526787..3528217
Genome browser
AA seq
476 aa
AA seq
DB search
MGTTSSQSKTLYQKLYDAHIVHEAPNETPLLYIDRHLVHEVTSPQAFDGLRAMGRPVRQP
GKTFATMDHNVSTQTKDINASGEMARIQMQELIKNCAEFGVSLYDLNHPFQGIVHVIGPE
QGMTLPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQTLKQGRAKTMRIEVNGTV
GAGITAKDIVLAIIGKTGSAGGTGHVVEFCGSAIEALSMEGRMTLCNMAIEMGAKAGLVA
PDDTTFAYLKGRQFAPTGEQWEQGVAYWRTLKSDADAQFDTIVTLDAADIAPQVTWGTNP
GQVIAVNQIIPAPESFSDPVERASAEKALAYMDLRPGIKLTEVAIDKVFIGSCTNSRIED
LRAAAAIAQGRKVAKGVQAIVVPGSGPVKAQAEAEGLDKIFIAAGFEWRLPGCSMCLAMN
NDRLEPGERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVSGHFADVRELSATTH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaacatcatctcagagcaaaacgttataccaaaaattgtacgatgcgcacatt
gtgcatgaagcccccaatgagaccccattgctgtatatcgaccgccatttagtgcatgag
gtcacctcaccgcaagcctttgatggtttgcgtgccatgggccgcccggtgcgtcaaccg
ggtaagactttcgctaccatggatcacaacgtttctacccaaacaaaagacattaacgcc
agtggtgagatggcccgtattcagatgcaagagttaattaaaaactgcgctgaattcggt
gtctcattgtatgacctgaaccaccctttccaagggatcgtgcatgtcattggccctgag
caaggcatgacgttaccgggcatgaccatcgtttgtggtgactcacataccgccactcac
ggcgcattcggctccttggcctttggtatcggcacctcagaagttgagcatgtgttggcg
acccaaaccctgaagcaggggcgagccaaaaccatgagaatcgaagtgaatggcactgtc
ggcgcgggtattacggctaaagacatcgtgctggcgattatcggtaaaaccgggagcgca
ggcggtactggccatgtggtggagttctgtggcagcgcgattgaagcgttgagcatggaa
ggccggatgacattatgcaacatggcgatcgaaatgggggccaaagccggtttggttgcc
cctgatgacaccacctttgcctatctgaaaggccgtcagttcgccccaactggcgagcaa
tgggaacaaggtgttgcctactggcgtaccctgaaatctgatgctgatgcccaattcgat
accatcgtgacactggatgccgctgatatcgcgccacaggtgacgtggggaaccaatccg
ggtcaggtcattgcggttaatcaaatcattcctgcccctgagtctttcagcgatccggtc
gaacgtgcatcagcagagaaagccttagcttatatggacttgcgccccggcattaaattg
actgaagtggcgattgataaagtctttatcggctcttgcactaactcacgtattgaagat
ttacgtgcggcagcggctattgcccaagggcgtaaagtcgccaagggtgtgcaagctatc
gtggtgccaggctccggcccggtgaaagcgcaggcagaagcggaaggtttggataagatc
tttatcgccgcaggttttgagtggcgtctgcccggttgctcgatgtgtttggccatgaat
aatgaccgcctggagcccggcgaacgttgtgcctccaccagcaaccgtaattttgaaggc
cgccaaggccgtggggggcgcacacatttggtcagcccagccatggccgccgctgccgcc
gtcagtggtcattttgctgatgttcgcgaattatccgccaccacccactaa
DBGET
integrated database retrieval system
