Yersinia pseudotuberculosis ATCC 6904: DJ40_1992
Help
Entry
DJ40_1992 CDS
T03307
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22051
miniconductance mechanosensitive channel
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypq02000
]
DJ40_1992
Transporters [BR:
ypq02000
]
Other transporters
Pores ion channels [TC:
1
]
DJ40_1992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AIN13750
LinkDB
All DBs
Position
2194390..2197731
Genome browser
AA seq
1113 aa
AA seq
DB search
MRPIISWSFGLLLSFFLLMPLYAATQPNEEQVRQELKLAESNKTTPNQAEIVQALQGALS
WLADAKESDIRAQQYQKAIDDFPKLTRELRQQLAQEGDKPLPVPSNLSTSDLEQQVLQVS
SQLLELNRLSQQEQDRAREISESLGQLPQQQSEARRMLAEIGPRIQSQSNPSTPVAQAQL
TLLQAEAVARKAKVNELELSQLSANNRQELSRLQVELYKKREARVQAQLQSLRNNLNNQR
QQAAEQALERTELLAEQGGDLPESITQQLQRNRELSQALNQQVQRIDLISSQQRQAVAQT
QQVRQALNTIREQAQWLGVSTALGETLRAQVAKLPEMPKSQQLDRDMAQLRVQRLQYEDM
LEKLQQQKTTLKQDDGTPLTPDQQRILDAQWRTQSELLNSLLSGYDTQILELTKLKVANS
QLVDALNGVREATHRYLFWVADVSPISLSYPLAVAQDLTRLLSLDTLSQLSGAFVMMMTS
QETLLPIIAALLFVGFSVSSRRHYHAFLERASSRVGKVTQDHFSLTLRTVFWSILMALPL
PVLWAALGYGLQNAWSYPMAIAIGNAVTATVPVLWVFMISASFAHPHGLFITHFRWSPTQ
VARAMRFYRLSIWLIVPLMMALITFENYNDREFAGTLGRLCFILLCIALSLVTNSLKRAG
IPLYLDKKGSGENMINVALWGLLLSAPLIAALASALGYLTTSQALLARLETSVAIWFFLL
VVYHIIRRWMLIQRRRIAFDRAKQRRADILAQRARGEEDSPHSNSTEGSIDVEEPIIDLD
VISAQSLRLVRSILTMIALVSVIVLWSEIHSAFGFLENIRLWDVSSTINGIESVQPITMG
SLLIAVLVLIITAQLVRNLPALLELALLQHLDLTPGTGYAISTITKYLVILFGGLLGFSL
LGIEWAKFQWLVAALGLGLGFGLQEIFANFVSGLIILFEKPIRIGDTVTIRDLTGSVTKI
NTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSITRVVLTVPAPAETSSEEVTNVLMT
AAQRCTLVLDTPPPEVYLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGYREHGI
TLPFPPFQARLETLGRGTGRTISSGRSRTPGSL
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcccgataatttcatggtcttttggtctattactgtcgtttttcctgttaatgccg
ctatatgcggcaactcagcctaacgaagagcaggtgcggcaagagctgaagctggctgag
tccaataaaacgacaccgaatcaggcagagattgttcaggcgcttcaaggggctcttagc
tggcttgcggatgcaaaagaatcagatatacgcgcccagcagtatcaaaaagccattgat
gattttcctaagcttactcgcgagttacgtcagcaattagcccaggaaggggataaacct
ttgccggtccccagcaacttgtccacatctgatttggaacaacaggtgctacaagtcagc
agccaattgctggagctgaaccgtttatcacagcaagagcaagaccgcgcccgggaaatc
agtgaatcccttgggcaattaccgcaacaacagtccgaagcccggcgaatgctcgcagag
atcggcccgcgaattcagtcacaaagtaatccctcgacgcccgtcgcccaagctcagctt
acgctattgcaagctgaagcggtggctcgtaaagccaaagtcaatgagttagagctttca
caactgtctgccaataaccggcaggagctgtcccggctacaagtcgaattatacaaaaag
cgcgaagcacgggttcaggctcagcttcagtccctgcgtaataacctgaataatcaacgc
caacaagccgcggaacaggcacttgagcggacagagttgctggcagagcaagggggggat
ttacccgaatctatcacccagcagttacaaagaaaccgtgagttatctcaggcgcttaat
cagcaggtacagcggattgatcttatctcttcccagcaacgccaggctgtcgcgcaaact
cagcaagtccggcaagcgctaaacactatccgtgagcaggctcaatggcttggggtctca
accgcgttgggcgaaaccctacgagcgcaggtcgccaagctgccagagatgcccaaatcc
caacaactggatcgcgatatggcacagttgcgggttcagcgcttgcaatatgaagatatg
ctggaaaaattacagcaacagaaaaccacgttaaaacaggatgatggcaccccgctcacg
cccgatcagcaacgcattctggatgcccaatggcggacacagagcgaattactgaattct
ctgctttcaggctatgacacgcaaattctggaactgaccaaactgaaagtggctaacagt
cagttagttgacgcattaaatggggtgcgtgaagccactcaccgctatctgttctgggtg
gcagatgtcagccctatttcgctttcttatcctcttgctgtggctcaggacctcacccgc
ctactgtcactggataccttgtcgcagttgagtggcgcttttgtcatgatgatgaccagc
caggaaaccctgctgcccattatcgctgccctgctatttgtcggtttcagtgttagctca
cgccgccactaccatgccttcctcgaacgggccagtagccgggtgggcaaagtgacacaa
gaccacttctccctgacgttacgcacggtattctggtcaattctgatggctctccccttg
ccagttttatgggcggctctgggttatggtctgcaaaatgcctggtcatatccgatggcc
attgcgattggcaatgccgtcactgccaccgtgcccgtgctctgggtgtttatgatcagc
gcctcgtttgctcatccacacgggctgtttattactcacttccgctggtcgccaacacaa
gttgcgcgcgcaatgcgtttttaccgcctgtcaatatggttaattgtcccattaatgatg
gcgctgattacgtttgaaaattataacgaccgcgagtttgctgggacactgggccggctg
tgctttattttgctgtgtattgcattaagtttggtcacaaacagcctgaaacgggccggt
atcccgctgtatctggataaaaaaggttcgggcgagaatatgattaacgtggcgctgtgg
gggttgctgctgtcagctccgttaattgcagcgctggcctcagcattaggctatctcacc
acctcacaagcgctgttggcacgtctggagacctcggtcgctatctggttcttcctgtta
gtggtctatcatattatccgccgttggatgctgatccagcggcggcgtattgcctttgat
cgcgccaagcagcgccgcgccgatattctcgcgcagcgcgcccgtggtgaggaagattcg
ccacacagtaacagcactgaaggctcgattgatgtcgaggagccgatcattgatttggat
gtgatcagcgcccaatccttgcggttggttaggtcgatcctgaccatgatagccttggtt
tcagtgatcgtgctgtggtctgaaattcattccgcttttggcttcctggaaaacattcgc
ttgtgggatgtgtcatccaccatcaacggtattgagtcagtccagccaatcaccatggga
tctttattgatcgccgtcttggtgctgattatcaccgcccagttggtgcgtaatctgccc
gccttactggagctggcactgttacagcatttggatctgacgccgggaacgggctatgcc
atctccacaatcaccaaatatctggtgatcttatttggtggtttgcttgggttctccctg
ctcgggattgaatgggcgaagttccaatggttggttgccgcactcggtttaggtttgggt
tttggtttacaggagatttttgccaactttgtttctggcctgatcattctgttcgaaaaa
ccgatccggattggcgataccgtgaccattcgtgatctcactggtagcgtgacgaaaatc
aatacgcgcgccaccacgatttccgattgggaccgcaaagaaattattgtgccgaataaa
gcttttattaccgagcaatttattaactggtcactctcggattccattacccgtgtggtc
ctcaccgttcccgcacccgcggagaccagcagtgaggaagtcactaacgtattaatgacc
gcggcccagcgctgcacgttagtcctggataccccgcctccagaggtctatctggtcgat
ctacaacaagggattcagattttcgaactgcgtatttatgccgctgaaatgggccaccgg
atgccactgcgccatgaaatccatcagttgattctggccggctaccgtgagcacggtatt
accctaccattcccaccgttccaagcgcggttagaaactctggggcgcggcactggacgt
acgatttcttcgggccgcagccgcacaccgggtagtttgtaa
DBGET
integrated database retrieval system
