Yersinia pseudotuberculosis ATCC 6904: DJ40_55
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Entry
DJ40_55 CDS
T03307
Symbol
nifJ
Name
(GenBank) ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00010
Glycolysis / Gluconeogenesis
ypq00020
Citrate cycle (TCA cycle)
ypq00620
Pyruvate metabolism
ypq00650
Butanoate metabolism
ypq01100
Metabolic pathways
ypq01110
Biosynthesis of secondary metabolites
ypq01120
Microbial metabolism in diverse environments
ypq01200
Carbon metabolism
ypq01210
2-Oxocarboxylic acid metabolism
Module
ypq_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DJ40_55 (nifJ)
00020 Citrate cycle (TCA cycle)
DJ40_55 (nifJ)
00620 Pyruvate metabolism
DJ40_55 (nifJ)
00650 Butanoate metabolism
DJ40_55 (nifJ)
Enzymes [BR:
ypq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
DJ40_55 (nifJ)
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GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4
Fer4_10
TPP_enzyme_C
Fer4_16
Fer4_6
Fer4_9
Fer4_21
Fer4_2
Fer4_8
Fer4_17
Fer4_4
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
AIN16122
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Position
complement(53556..57089)
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AA seq
1177 aa
AA seq
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MITTDGNSAVASVAYRASEVIAIYPITPSSTMAEQADAWSGGGKVNIWGDVPRVVEMQSE
GGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTIATHALSIF
GDHSDVMAVRQTGCAMLCASSVQEAQDFALISQIATLNSRIPFIHFFDGFRTSHEINKIE
PLNDETLRQLLPQAGINAHRSRALSPDHPVVRGTSANPDTYFQSREATNPWYNNTYQHVA
DAMQAFAEATGREYKPFEYYGHPQADRVIILMGSAIGTCEEVIDTLLTRGEKVGVLKVRL
FRPFSAQHLLALLPASVGKIAVLDRTKEPGALAEPLYLDVMTALAEAYSRGDRDTLPKVI
GGRYGLSSKEFGPHCVLAIFRELSLDLPRPRFTVGIFDDVTGLSLPLSDEKIESRATLEA
LFYGLGSDGSVSATKNNIKIIGNSTALYAQGYFVYDSKKAGGLTVSHLRVSQTPINSAYL
VSHADFVGCHQLQFIDIYQMAERLKPGGIFLLNTPFSADEMWPRLPQDVQAVLHQRHARL
FVINAAKIARECKLGARINTVMQMAFFHLTQILPTAMAQEQLRAAIERSYSNKGAEIVTR
NWQALDATLEALIEIPLQPIDENSPVRPPIVSDQAPDFVKTVTATMLAGLGDTLPVSAFP
PDGTWPVGTTQWEKRNIAENIPIWQPDLCTQCNHCVAACPHSAIRAKVVQPEAMAGAPDS
LQSLDVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPEIKAINMRPRLEHRAVE
KAHYDFFLKLPEIDKTQMERIDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRLL
IANATGCSSIYGGNLPTTPYTTNADGRGPAWANSLFEDNAEFGLGFRLTVDQHQKRVTRL
IQQLAPQLPDELVNQLINQEYTPEERRKQVSQLRQLLREIPGNDAQQLAADADYLVDKSI
WLIGGDGWAYDIGFGGLDHVLSLTENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHG
KRKARKDLGVSMMMYGHVYVAQISIGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYD
LAYSHDQMKQLTATGFWPLYRFDPRRADEGKTALALDSRPPSSDLTTTLLNEQRFRRLNT
QEPAVAAQLYAEAEKDLKKRYDFLSLLAGKTEKMPSE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgattacgactgacggcaacagcgcagtggcttctgtggcctatcgtgccagcgaagtt
attgctatctaccccattacccccagctctacgatggcagagcaagccgatgcttggtca
ggtggcggcaaagtgaacatctggggcgatgtgccgcgggtggtcgaaatgcagtccgaa
gggggggctatcgccacggttcatggggcattgcaaactggcgcattatccacctccttt
acctcctcgcagggattgttattaatgatcccaacactgtacaaactggctggcgaatta
acaccatttgtacttcatgttgcagcccggacaattgctacccatgcattatccatcttt
ggtgaccattccgatgtgatggcggtacgccaaacaggctgcgccatgttatgcgccagt
agcgtacaggaggctcaggattttgccctgatttcacagattgccaccctgaatagccga
attccctttatccatttctttgatggttttcgcacctcgcatgaaatcaacaaaatagag
ccactcaatgacgagacgttgcgccagttattgcctcaagcagggattaatgcgcaccgg
agccgggctctttcgccagatcacccggtggtacgcggcacctcagccaatccagatacc
tatttccagtcacgggaagccactaacccttggtataacaatacctatcagcatgttgcg
gatgccatgcaggcatttgctgaagccactgggcgtgaatataaaccgtttgaatattac
ggccatccacaagctgaccgtgtcattattttaatgggttccgctatcggtacctgcgaa
gaggttattgacaccttgctcactcgaggggagaaagtcggtgtgctaaaagtacgctta
tttcgccccttctccgcacagcatctgcttgcgctcttgcccgcgtcggtcggcaaaatt
gcggttttggatcgcaccaaagagcctggcgcattagctgaacccctgtatttggatgta
atgacggcattagctgaagcttatagccgtggtgatcgtgatacattgccaaaagtcatt
gggggacgctatggcttatcctccaaagaatttggcccccattgcgtattggccattttc
agagagctgtcattagacttaccacgcccccggtttacggttggaatttttgatgatgtg
accggcctatcgttgcccctaagcgacgaaaaaattgaatcgcgcgcaacattggaagcc
ctattttatggcctgggaagtgatggttcagtctctgccaccaagaataacatcaagatt
atcggcaacagcaccgcactctacgctcaaggttattttgtttacgattcgaagaaggct
ggaggcctgacggtctcacatctacgcgtaagccagacgccgattaactcagcctatctg
gttagccacgccgattttgtcggctgccaccagctacagtttatcgatatttatcaaatg
gctgaacgccttaaacccggagggatattcttactcaatacccccttcagcgcggatgag
atgtggccacgtttgccacaagacgttcaggcagtattgcatcagcgccatgcccgtttg
tttgtgatcaatgctgcgaaaattgcccgtgaatgcaaactcggtgcccgcatcaatacc
gtcatgcagatggccttcttccatctgacacagattctgccaacggccatggcacaagag
caattacgggccgcgattgaacgcagttacagcaataaaggggcagaaattgtcacccgc
aactggcaggcactggatgcaactctcgaagccttaattgagatcccgctgcaacctatt
gacgaaaacagccctgtacgcccaccgattgtttcagaccaagcgcccgatttcgttaaa
accgttacggcaaccatgctggcaggcttgggtgatacgctgccggtatcggccttcccg
cccgatggcacctggcctgtcggtaccacccaatgggaaaaacgcaatattgcagaaaac
atccccatctggcagccagacctttgtacacaatgtaatcactgtgtcgctgcctgccca
cactcggctatccgtgccaaagtggtacaacctgaggccatggccggtgcgccggacagc
ttacagtcactggatgttaaagcccgtgatatgcgtgggcagaaatatgtcttacaagtg
gcgcccgaagattgtactggctgcaacctgtgttatgaagtctgccctgccaaagatcgc
caaaatccagaaatcaaagcgattaacatgcggccgcgtctggaacaccgggcggtagaa
aaagcacattatgatttcttcctcaagctgcctgaaatcgataaaacacaaatggaacgt
atcgatatccggacttcacaattgatttcaccgctgttcgaatattccggagcctgctcc
ggttgtggtgaaacaccgtatatcaaattgttgacccagttgtatggcgatcgtctgctc
attgccaatgccaccggttgctcttcgatctatggcggtaacctgcctaccacgccatac
accaccaatgccgatggccgtgggcctgcatgggcaaactcattgttcgaagataatgct
gagtttggtttaggctttcgcctaaccgtcgatcagcatcaaaaacgtgttacccggctg
atccaacagctagcacctcaactgccggatgagttggtcaatcaactgatcaatcaggaa
tacaccccagaagagcggcgtaagcaagtctcacaattgcgtcagttgttacgtgagata
ccaggcaatgatgcacaacagttagcagcagacgccgactatctggtggataaatctatc
tggctgattggcggtgatggctgggcatatgatattggttttggcggtttggaccatgtc
ctgagcctgacagaaaatgtcaatgtgctggtactggacacccagtgctattccaatacc
ggtggtcagcaatccaaggcgactcccctcggggcggtcaccaaatttggtgaacacggt
aaacgcaaagcgcgcaaagatttgggtgtcagtatgatgatgtatggccacgtctatgtg
gcacagatctctattggggcacagctcaatcagacggtgaaagccattcaggaagcagaa
gcctatcccggcccgtcactgattattgcttacagcccttgtgaggaacacggttacgat
ttggcatacagccatgaccaaatgaagcaattgacggccaccggtttctggccattgtat
cgctttgacccgcgccgcgccgatgaaggcaaaaccgcgttagcactggattcacgccca
ccaagcagtgacttgaccaccacactgcttaatgagcaacgtttccgccggttaaatacg
caagaacccgccgttgccgcccagttatatgccgaggctgaaaaagatctgaaaaaacgc
tatgacttcttgagtttactcgctggcaaaacggaaaaaatgccttcggaataa
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