Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB2428
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Entry
YPTB2428 CDS
T00195
Symbol
ymfC
Name
(GenBank) putative pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yps03009
]
YPTB2428 (ymfC)
Enzymes [BR:
yps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
YPTB2428 (ymfC)
Ribosome biogenesis [BR:
yps03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YPTB2428 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAH21666
UniProt:
Q669Q6
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All DBs
Position
2871685..2872311
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AA seq
208 aa
AA seq
DB search
MNKFSVKNHKVNRFSTKAQARQSPPAAPRRVLLFNKPFDVLPQFTDESGRTTLQGFIPFK
DVYAAGRLDRDSEGLLVLTNDGKLQARLTQPAQKTGKVYFVQVEGVPDNDALTQLKRGVT
LKDGLTLPAGAELVAEPEWLWPRHPPIRERKTIPTSWLKITLYEGRNRQVRRMTAHVGFP
TLRLIRFSMGNLSLGNLQPGEWKEITDV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattctctgttaaaaatcacaaagttaaccgattcagcactaaggcacaagcc
aggcagtccccccccgctgcgccacggcgggtattgttattcaataaaccttttgatgta
ttaccgcaattcactgatgagtctggacgcaccactttgcagggtttcatcccttttaag
gacgtttatgctgctggccggttagatcgcgatagcgagggcttattggtattaaccaat
gatggcaagttgcaagccaggctcacgcaaccggcgcaaaaaacaggtaaagtctatttt
gtacaagtggaaggggtccctgacaacgatgcgctcacacagctaaaacgaggcgtaacg
ttgaaagatggcctgacgttacccgcaggcgcggagttagtggcagagcctgagtggcta
tggccgcgccatccccctatcagagagcgtaaaaccatcccgaccagttggttgaaaata
acactttatgaaggccgcaaccggcaagtacgtagaatgaccgcacacgttggcttccct
accctgcgcctgattcgttttagtatgggaaatttaagccttggcaacttacagcccggc
gaatggaaggagataactgatgtttaa
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integrated database retrieval system
