Yersinia pseudotuberculosis MD67: BZ21_957
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Entry
BZ21_957 CDS
T03677
Symbol
rafR
Name
(GenBank) HTH-type transcriptional regulator rafR
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ypu
Yersinia pseudotuberculosis MD67
Brite
KEGG Orthology (KO) [BR:
ypu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypu03000
]
BZ21_957 (rafR)
Transcription factors [BR:
ypu03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BZ21_957 (rafR)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_8
HTH_24
HTH_38
HTH_AsnC-type
HTH_23
HTH_28
HTH_50
HTH_IclR
HTH_3
HTH_Crp_2
HTH_Tnp_ISL3
HTH_36
Sigma54_DBD
HTH_35
Motif
Other DBs
NCBI-ProteinID:
AJJ04674
UniProt:
A0A3G5IZL7
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All DBs
Position
1075217..1076233
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AA seq
338 aa
AA seq
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MSLKKIANELGLSSTTVSRALNGYDDVAAETRERIIDAAKRLGYQPNSLARRLKMGRTDA
IALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDA
LIVAHTQPEDFRLQYLQKQNFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELGHQR
IAFVSTDARISYVDQRLQGYVQTMSEAGLMPLAGYLQKADPTRPGGYLAASRLLALEVPP
TAIITDCNMLGDGVASALDKAGLLGGEGISLIAYDGLPDDSLLDIAVTPIVQNTRTSVGK
QIASMICDLLGGKDPKELQVLWQPEIGEGETDGVNRRG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgaagaaaattgcaaatgagcttgggctgtcctccacaacggtaagccgcgcg
ttaaatggctatgatgatgttgcggccgaaacacgtgagcggattatcgatgcggccaag
agattgggttatcaaccgaattccttagctcggcggcttaaaatggggagaaccgatgcc
attgctttggcgtatccatcacgtccacgagtgttgaataattcgacatttttggaaatg
ataagttggataggtatcgaactcggaaaacggggtctcgatctgttgctcattcctgat
gaacctggtgagaaataccagtcacttatccacttggtggaaacgcgtagagtggatgca
ttgatcgtggctcatacccagcctgaagactttcggttgcagtatttgcagaaacaaaac
tttccttttttggcattggggcgtagccatttacccaagccatatgcatggtttgatttt
gataatcacgctggcgcttcgttggcagtgaagcggcttctcgaacttgggcaccagaga
attgcatttgtgagtaccgatgcaaggatttcatatgtcgatcagcgtttgcagggatat
gtgcagacgatgtccgaagcgggcctgatgccgttggcagggtatctgcaaaaagcggat
cccactcgtcctggcggttatcttgctgcctcgcgtttattggcgcttgaggttcctcct
actgccattatcaccgactgtaatatgctgggtgatggcgtggcgagtgcgcttgataaa
gcgggcttgttgggcggcgaggggatatcgcttatcgcttatgatgggctaccggatgat
agtttgttagatattgccgtgacccctattgttcaaaatacgcgtaccagtgtaggtaaa
caaattgcatcaatgatttgtgatttactgggggggaaggatcctaaagaactacaggtc
ctctggcagccagaaataggagagggtgaaaccgacggggtgaatcgacgtggataa
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