Yersinia pestis D182038: YPD8_0485
Help
Entry
YPD8_0485 CDS
T01833
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ypx
Yersinia pestis D182038
Pathway
ypx00470
D-Amino acid metabolism
ypx00550
Peptidoglycan biosynthesis
ypx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ypx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YPD8_0485 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YPD8_0485 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypx01011
]
YPD8_0485 (murD)
Enzymes [BR:
ypx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
YPD8_0485 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ypx01011
]
Precursor biosynthesis
Amino acid ligase
YPD8_0485 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ACY61175
LinkDB
All DBs
Position
595424..596740
Genome browser
AA seq
438 aa
AA seq
DB search
MVDYQGKKVVIIGLGLTGLSCVDFFIARGVTPRVMDTRINPPGLDQLPESVEQHVGDLNQ
EWLLDADLIVVSPGMALAHPALSEAAEAGVEIIGDIELFCRENQAPVVAITGSNGKSTVT
TLVGEMAKAAGWSVGGGGNIGVPALTLLKQDNQLTVLELSSFQLETTHSLRASAATILNV
TEDHTDRYPLGLQQYRAAKLRVYENAKVCVVNADDALTMPVRGADSRCISFGVDVGDYHL
NKQQGEIWLRVRGEKVLNTREMKLSGRHNYTNALAALALADAVGIPRASSLKALTTFSGL
PHRFQLVLERHGVRWINDSKATNVGSTEAALDGLQVDGTLHLLLGGDGKSADFSGLTHFL
QGDRIKVYCFGRDGGQLAALRPDVSQLTETMAQAMALVAKVVLPGDRVLLSPACASLDQF
RSFEHRGNEFARLAEELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggttgattatcagggtaaaaaagtggtcatcatcgggctggggctaaccggcctttcc
tgcgttgatttctttatagcgcgtggtgtcacgccgcgcgtgatggatacccgcatcaat
ccaccgggcttagatcaattacccgaaagtgtcgaacagcatgtgggtgatttgaaccaa
gaatggctactggacgctgatttaattgttgttagccccggtatggctctggcacatcct
gcattaagtgaagccgccgaggccggtgtcgagatcattggcgatatcgaactgttctgc
cgtgaaaatcaggcaccggttgtggctatcactggctccaacggcaaaagtaccgtgacg
acgctggtcggtgagatggcaaaagcggcaggttggtcagtggggggcggcggcaatatc
ggcgttccggcactgacattgctgaagcaagataaccaattaactgtcttggaattatca
agtttccaactggaaaccacccacagcttgcgggcctctgctgcgacgattctgaacgtg
acggaagatcatactgaccgttatccactcggtttgcagcaataccgtgcggcgaaactg
cgggtgtatgaaaatgccaaggtttgtgtcgtgaatgccgatgatgcactcaccatgccg
gtccgtggtgctgatagccgttgcatcagttttggggtcgatgtcggtgactaccacctg
aataagcagcagggtgaaatttggttacgggttcgtggtgagaaagtgctgaacacccgt
gaaatgaaattaagtgggcgtcataactataccaatgcgctggccgccctggcattagct
gatgccgtgggtatcccacgggcatccagtttgaaagccttgacgaccttttccggcttg
ccacaccgcttccaattggtgcttgagcgccatggtgtgcgctggatcaacgactccaaa
gcgaccaacgtgggcagcactgaagccgcgctggatggtttacaggttgatggcaccttg
catttattgttggggggcgacggtaaatctgctgatttctccgggttaacgcacttcctg
caaggggatcgcatcaaggtctactgttttggccgcgatggcggtcaattggctgcgttg
cgccctgacgtctctcaacttaccgagacgatggcgcaggctatggcgttggtggcaaaa
gttgtgctacccggcgatagggtgctgctgtcacctgcgtgtgccagcctggatcaattc
cgcagctttgagcatcgtggtaatgagtttgctcgtctggcagaggagttaggctga
DBGET
integrated database retrieval system