Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_03340
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Entry
UGYR_03340 CDS
T03887
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00250
Alanine, aspartate and glutamate metabolism
yrb00410
beta-Alanine metabolism
yrb00430
Taurine and hypotaurine metabolism
yrb00650
Butanoate metabolism
yrb01100
Metabolic pathways
yrb01110
Biosynthesis of secondary metabolites
yrb01120
Microbial metabolism in diverse environments
yrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
UGYR_03340
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
UGYR_03340
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
UGYR_03340
00430 Taurine and hypotaurine metabolism
UGYR_03340
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UGYR_03340
Enzymes [BR:
yrb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
UGYR_03340
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GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AKA37526
UniProt:
A0A085UBP8
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All DBs
Position
727703..729106
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AA seq
467 aa
AA seq
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MTKKNDTNDFRSTLLDSRFGSESIRHIAESKRFPEKEIREDVAFQIINDELFLDGNARQN
LATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDMRCVNMVADLWNAPKQKNGQAV
GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNFVCGPVQVCWHKFARYWDVEIRE
LPMEPGQLFMDPQRMIEACDENTIGVVPTFGVTYTGNYEFPKPLHDALDKLQRETGLDID
MHIDAASGGFLAPFVAPDIEWDFRLPRVKSISTSGHKFGLAPLGCGWVIWRDEASLPEEL
VFKVDYLGGQVGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQSASYQVAAFLAEEIAK
LGSYEFICSGGVEEGIPAVCFRVKEGAKPGYTLYDLSERLRLRGWQVPAFALNGGMSDVV
VMRIMCRRGFEMDFAELLLEDFKSSLNYLSQHPSLGGLASQNSFKHT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaaaaatgataccaatgattttcgctcaacacttctagactctcgcttcggt
tctgaatctattcgtcatatagctgaaagcaaacgtttccctgaaaaagagatacgcgaa
gatgtggcttttcaaattatcaatgacgaattatttctcgacggaaatgcacggcagaac
ttagcgacgttttgccaaacgtgggatgacgataacgtgcataagctgatggatctctca
atcaataaaaactggattgataaagaggaatatcctcagtctgcagccattgatatgcgc
tgtgtcaatatggtcgccgatctgtggaatgcaccaaagcagaaaaatggtcaggccgtt
ggtactaacaccatcgggtcttcagaagcctgcatgctcggtggaatggcgatgaaatgg
cgttggcgtaaacgcatggaagccgctggtaaaccgaccaataagccaaactttgtttgt
ggccctgttcaggtttgctggcataaatttgcacgctattgggacgtcgaaatacgtgaa
cttccaatggagccaggccaactatttatggatcctcagcgaatgattgaggcttgtgat
gaaaataccatcggggtagtaccaacctttggtgtaacttacacgggtaattatgagttt
cctaaaccacttcatgatgcgttagacaaattgcaacgcgagacgggtttagacattgat
atgcatatcgatgcagccagtggtggctttttggcaccttttgttgccccggatatcgaa
tgggacttccgtttaccgcgcgtgaagtctatcagtacttcaggccacaagtttggtctg
gcacctctgggctgcggttgggttatttggcgtgatgaagcatcactacctgaagagttg
gtattcaaggtcgattatctgggtggacaggtggggacattcgctatcaatttttctcgt
ccagcgggacaagttatcgctcaatattatgagtttttacgcttgggtcgtgaaggttat
accaaagtacaaagtgcctcttatcaggttgccgccttcttggcagaagaaattgccaaa
ttaggttcttatgaatttatctgttccggtggtgtcgaggaaggtattcctgcggtttgc
ttccgcgtaaaagaaggcgcaaaacctggttacaccttgtatgacctatctgaacgttta
agactgcgcggttggcaagtacccgcgtttgccctaaacggcggaatgtctgatgtcgta
gtgatgcgtattatgtgccgacgtggcttcgaaatggactttgccgaattattattagaa
gactttaaatcctcgctgaactacttaagccagcacccatcgctgggtggattggcgagc
caaaatagttttaaacatacataa
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