Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_03925
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Entry
UGYR_03925 CDS
T03887
Symbol
lacZ
Name
(GenBank) beta-D-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00052
Galactose metabolism
yrb00511
Other glycan degradation
yrb00600
Sphingolipid metabolism
yrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
UGYR_03925 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
UGYR_03925 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
UGYR_03925 (lacZ)
Enzymes [BR:
yrb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
UGYR_03925 (lacZ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
AKA37626
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All DBs
Position
852126..855269
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AA seq
1047 aa
AA seq
DB search
MNAPREQANRCESLATVLARRDWENSGITQYNRLDTHPPFQSWRDINQARNDMASSRLRT
LNGNWNFSYFSQPEAVPSSWVANDLPDAALLPVPANWQLFGYDCPIYINVQYPIPVNPPY
VPTENPTGCYSTEFTLSPDWHASGQTRIIFDGVSSAFYLWCNGQWVGYSQDSRLPAEFDL
TPYLNSGKNRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVTLLHKPDIHLRDIHIQTLLSP
GFHSAELTVMAAINLPTFAPPNSVDYSVEVQLWLNNQLVTWKRQPLGSDIIDERGTYSDR
TTLTLRVDSPELWNAEVPTLYRVVVALSSSLRSLIEAEAYDVGFRQIEIERGLLKINGKP
ILIRGVNRHEHHPETGQAIDESTMRQDILLMKQHNFNAVRCSHYPNHPMWYRLCDRLGLY
VVDEANIETHGMKPMEQLANDPRWFGAFSERVTRMVQRDRNHACIIIWSLGNESGHGSSH
DALYAWVKSNDPTRPVQYEGGGANTKATDILCPMYARVDKDQPFPAVPKWSIKKWISLPE
ESRPLILCEYAHAMGNSFGGFDRYWRAFRQYPRLQGGFVWDWVDQSLTQYDMHNQPFWAY
GGDFGDIPNDRQFCMNGLVFPDRSPHPSLYEAQRAQQFFQFSLSSTEPLMVEITSEFLFR
HTDNERLHWQLAVDGQHLCSGKIALNIPPEGSQKIQLIEQLPAITIQGELWLTVEIRQPK
ETPWSEANHRTAWQQWQLPTMLPKTIRTKQTPIQALTHPTLRHTEQHMIVEHQGQSWLFH
RQSGLLEQWFYQEIPLLLSPLREQFIRAPLDNDIGISEATHIDPNAWVERWKKAGMYNLN
QRCLSIQADEISSGVQIVAEYSHESVQHCLLKSRWVYHIDSNGKMLIDVNVTVASGSPAP
ARIGMCCQLNQVAPQVSWLGLGPHENYPDRQLSALFDYWSLPLDALHTPYTFPGENGLRC
NTRKLHYGNWQLSGLFNFSISRYSLQQLMDTTHQHLLKPETGTWLNIDGFHMGVGGDDSW
SPSVDADYLLTAGQYHYQVCWQFSEFD
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaccgagagaacaagcaaatagatgtgagtcattagctacagtgttagctcga
cgcgactgggagaattcggggataacacaatataaccgtttagatacgcatccccctttc
cagagttggcgagatatcaatcaagctcgtaacgatatggcctcatcccgcttgagaacg
ttgaatggaaattggaatttcagctactttagccagcccgaagctgttccctccagttgg
gttgcgaacgatctacctgatgcagcgctcttgcccgtacctgcaaactggcaactattc
ggttacgactgcccaatttacatcaatgttcaatatcctattccggttaatccaccttat
gttcctactgaaaacccgactggctgctactctacggaattcactctcagtcctgattgg
catgcctcagggcaaacccgcattatttttgatggcgtaagttcagcgttttatctgtgg
tgtaacggtcaatgggtgggatattctcaagacagtcgcttgcccgccgagtttgacctt
actccttacttgaattctggcaagaaccgtcttgcggtaatggtattacgctggagtgac
ggcagttatcttgaggatcaagatatgtggcgtatgagcggaattttccgcgatgtcact
ttattacataaacctgatattcatctgcgtgatattcatatccagactctcctctccccc
ggttttcattctgctgaattaacagtaatggccgcaattaatcttccaacctttgctcct
ccaaattcggtagactattcagttgaagttcagctatggctgaataaccaacttgttaca
tggaaacggcagcctctgggaagtgacattattgatgaacgaggaacctactccgaccgc
acaacattaacactcagagttgattctcctgagctgtggaacgcagaggttcccacgctg
tacagagtggtggtcgcgttaagctcttcactgcgctcgctgattgaagcggaagcctac
gatgtaggattccgacagattgaaattgaacggggactgctcaaaatcaatggaaaacct
attctaattcgcggagttaatcgccacgaacaccacccagaaacaggccaggccattgat
gaatcgacaatgcgtcaggatatcctattaatgaagcagcacaacttcaacgccgtgcgc
tgctctcactatcccaatcatcctatgtggtatcgcttatgcgatcgcttgggattgtac
gtggttgatgaagccaatattgaaactcacgggatgaaaccaatggagcaactggccaat
gaccctcgatggttcggagccttcagtgagcgagtcacgcgcatggttcaacgcgatcgt
aatcatgcctgtatcattatctggtcattaggcaacgaatcaggccatggttctagccat
gacgctttatatgcctgggtaaaatccaatgacccgacccggccagtgcaatatgaagga
ggtggggccaataccaaagctaccgatattctttgccctatgtatgccagagttgacaaa
gaccaaccattccctgccgtacctaagtggtcaataaaaaaatggatcagtcttcctgaa
gagtcccgtccattaatactgtgcgaatatgcccatgcgatgggaaatagctttggtggg
tttgatcgctattggagagcgtttcgtcaatacccgcgtctgcaaggtggatttgtttgg
gattgggttgatcaaagcctgacccaatacgatatgcataaccaaccattttgggcctac
ggtggggattttggcgatatacctaatgatcgacaattttgcatgaatggtctggtattc
cctgatcgtagtcctcaccctagcctgtatgaagcccagcgagcacagcaattctttcaa
ttttctcttagcagcacagagccgctaatggtagaaatcaccagcgaatttttattccgt
cacactgataacgaacgcctgcattggcaactcgctgtcgatgggcaacacctttgttca
ggtaaaattgcactcaatattccaccagaaggtagtcagaagattcaactaatcgaacag
ctaccagccatcacaatacaaggtgagctgtggctgacggttgagattcgtcagcctaag
gaaacaccttggtcggaggcaaaccatcgaacagcctggcagcagtggcaactgccgacc
atgctaccgaagacaatccggacaaagcaaactcctatacaagcgttaacgcacccaacc
ctgagacatactgaacaacatatgattgttgaacatcaaggccagagttggctatttcac
cgccagagcggcttgttggaacaatggttttatcaggaaatccctttattactcagccca
ctgcgagagcagtttattcgtgcgcctcttgataacgatattggtattagtgaggctacg
cacattgatcccaatgcctgggttgaacgctggaaaaaagcaggtatgtataacctgaat
cagcgttgtctatcgatacaggccgatgaaatcagcagcggagtacaaattgtagctgag
tacagccacgaatcagtacaacactgtttactgaaaagtagatgggtatatcatattgat
tcaaatggaaaaatgttgattgatgtaaatgtaactgttgcatcaggttcacctgcacct
gctcgtattggtatgtgttgccagctaaatcaggtggcacctcaggtcagttggttaggc
ctcggtccgcatgagaattacccagaccgccagttatctgcgctgtttgattattggtct
ctgcctttggacgccttacatactccctacacttttccgggggaaaatggactgcgatgt
aatactcgtaagcttcattacggtaactggcagctttcaggcttattcaatttttcaata
agtcgctacagtttacagcagttgatggataccactcatcaacacttattgaaacctgaa
acgggtacctggctaaatatcgatggttttcatatgggtgtcggcggggacgattcgtgg
agtccaagtgttgatgcagactatttgcttacagcgggacagtaccattatcaggtatgt
tggcaattcagtgagttcgattag
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