Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_09315
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Entry
UGYR_09315 CDS
T03887
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00860
Porphyrin metabolism
yrb01100
Metabolic pathways
yrb01110
Biosynthesis of secondary metabolites
yrb01120
Microbial metabolism in diverse environments
yrb01240
Biosynthesis of cofactors
Module
yrb_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
yrb_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
UGYR_09315 (hemD)
Enzymes [BR:
yrb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
UGYR_09315 (hemD)
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GFIT
Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
AKA38577
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All DBs
Position
2052018..2052758
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AA seq
246 aa
AA seq
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MTILVTRPSPAGEQLVSRLRAMGRVAYHAPLIDFSPGRDLPRLPTMLAGMQAGDLVFALS
QNAIRYANPLLNRNKLFWPAELSYYAIGRSTALALHTVSHLKVTFPPAGETSEMLLLLPD
LQDLRGKKVLLLRGNGGRELLGESLAARGAEVTFCECYQRSPIYYEGSEQSAHWQRSGVD
MLVVTSGEMLQQLYTLIPDYYRSSWLLRCRLIVVSDRLATLASQLGWSDIRVAENADNDA
LIRALQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccattctggtaacccgtccttctccagccggtgagcaattagtcagccgcctgcgc
gctatgggccgggttgcctatcatgcgcccctgattgatttttcaccgggtcgtgacttg
cctcgcttaccgaccatgctggcgggaatgcaggccggtgatttggtttttgcgctgtca
caaaatgccattcgttatgccaacccgctgttaaacagaaataaactgttctggcccgct
gagctatcttattatgcaataggtcgctcaacagcattggcgctgcatacggttagccac
ctgaaagtcactttcccaccggcgggcgaaaccagtgagatgctgcttttgctacctgat
ttacaggatttacgtggaaaaaaagtgctgttactgcgaggcaacggtgggcgggaactg
ctcggcgaaagtctggctgcgcgtggcgctgaagtgacattttgcgaatgttatcaacgt
agccctatttattacgaaggcagtgaacaaagtgcgcattggcaacggtctggcgtcgat
atgttggtggtgaccagcggtgaaatgttacaacagctctatactttaattcctgattac
tatcgttcttcctggctgctgcgctgccgcctgatagtggtgagtgatcgtttggcgacc
cttgccagccaattaggttggagcgacattcgggtcgctgagaatgccgataatgacgcg
ctgatccgcgcgctacaataa
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