Yokenella regensburgei: HEC60_09845
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Entry
HEC60_09845 CDS
T06519
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
yre
Yokenella regensburgei
Pathway
yre00521
Streptomycin biosynthesis
yre00523
Polyketide sugar unit biosynthesis
yre00541
O-Antigen nucleotide sugar biosynthesis
yre01100
Metabolic pathways
yre01110
Biosynthesis of secondary metabolites
yre01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HEC60_09845 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HEC60_09845 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HEC60_09845 (rfbC)
Enzymes [BR:
yre01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HEC60_09845 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QIU89579
UniProt:
A0A6H0K8A4
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Position
complement(1995079..1995618)
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AA seq
179 aa
AA seq
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MNVIKTPLKDCVIIEPKVFGDSRGFFLEAWHKEKYEQAGITGNFVQDNRSRSSRNVLRGL
HFQHTKPQGKLVSVISGEVYDVAVDLRPGSETFGQYVGVILSGEKNNQLYVPPGFAHGFC
VLSEYADFHYKCTDFYDPSDEGGIIWNDPDIGIEWPVTSPLLSDKDIKLMTLAEYGNSL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcattaaaacacctttaaaagactgcgttattatcgagccaaaagtttttggc
gactcccggggctttttcctggaagcatggcataaagaaaaatatgagcaggctggaatt
acaggtaactttgttcaggacaaccgctctcgctcgagccgtaacgtactgcgcggattg
cactttcagcacactaaaccacagggtaagttagtgagcgtgattagtggtgaagtttat
gacgttgctgtggatcttcgcccgggctccgaaacctttgggcaatatgttggcgttatt
ctttctggtgagaagaacaaccagctttacgttccgcctggctttgcgcatggcttctgt
gtattgagcgaatatgctgattttcattacaaatgtactgatttctacgatccgtcagac
gaaggcggcattatctggaacgatcctgatattggtattgaatggcctgttacgtcgccg
ctgctgtctgataaggatattaaattaatgactcttgctgaatacggaaattcattatga
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