Yokenella regensburgei: HEC60_10480
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Entry
HEC60_10480 CDS
T06519
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
yre
Yokenella regensburgei
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yre03400
]
HEC60_10480
DNA repair and recombination proteins [BR:
yre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HEC60_10480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
UPF0547
AAA_16
SLFN-g3_helicase
AAA_22
zf-tcix
AAA
MgtE_N
zf-ribbon_3
DZR
Motif
Other DBs
NCBI-ProteinID:
QIU89702
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All DBs
Position
2143351..2145108
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AA seq
585 aa
AA seq
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MTFTLRPYQQEAVDATLAHFRRHREPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCALGLDADIYAAGLKRKESHGKVVFGSVQSVARNLDHFQAEFSLLIVDECH
RIGDDEESQYQQILNHLTGVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGTEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRVTPH
IISQIIEFAEARKGVMIFAATVEHAREITGLLPADDAALITGETPGPQRDELITAFKAQQ
FRFLVNVAVLTTGFDAPHIDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNP
HDLYTPEVGAPKGKSDNVPVQVFCPGCGFANTFWGKTTADGTLIEHFGRRCQGWLEDDDG
NREQCDYRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALKLKDALVLRCSGMQ
LQHGADEKGEWLKITYFDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITA
ADIVAQEPLLRHPDFVVARKKGQFWQVREKVFDYEGRFRRANELR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacttttacccttcgtccctaccagcaggaagccgtcgacgccaccctcgcccacttt
cgtcgtcaccgcgaaccggcagtgatagtgctgcccaccggtgccggaaaaagcctcgtc
attgccgagctggcaaggctcgcgcgtggccgcgtgcttgtgctggcgcatgtcaaagag
ctggtcgcgcagaaccatgctaaatattgtgcccttggcctcgatgccgatatttacgcc
gccgggcttaaacgcaaagagagccacggcaaagtcgtgtttggcagtgttcagtcggtc
gcccgtaatcttgaccatttccaggccgagttttcgctgctgattgtcgatgaatgccac
cgcattggcgacgacgaagagagccagtaccagcaaatccttaatcatctgaccggggta
aacccgcacctgcgtctgctcgggctcactgctacgccttttcgtctgggtaaaggctgg
atctatcaattccactaccacggcatggtgcgcggtaccgagaaagccctgtttcgcgac
tgcatctatgagctcccgctgcgctatatgataaagcacggttatctgacgccgccggag
cggctcgatatgccggtggtgcagtacgatttcagccgtctgcaggcgcagagcaatggt
cttttcagtgaggcagacctcaaccgcgagctgaaaaaacagcaacgcgtgacgccgcac
atcatcagccagataattgagttcgccgaagcgcgcaaaggggtgatgatttttgccgcc
accgtcgaacacgctcgggaaatcaccggcctgctgcccgcagacgatgcggccctgatt
accggcgaaaccccgggcccgcagcgcgatgagctgataaccgccttcaaagcgcagcag
tttcgttttctggtcaacgtcgcggtactaaccaccggatttgatgctccgcatatcgac
ctgattgcgattctgcgcccgaccgagtccgttagcctgtatcagcagattgtggggcgt
ggactgcgcctctccccggggaagaccgactgcctgatcctcgactatgccggtaatcca
cacgacctttacaccccggaagtgggggcaccaaaaggaaaaagtgacaacgtcccggta
caggttttctgcccaggatgcggctttgccaataccttctgggggaaaactaccgccgac
ggtacgctgattgaacacttcggtcgtcgctgccaggggtggcttgaggatgacgacggc
aaccgcgaacagtgcgattatcgcttccgctttaaaaactgcccgcaatgtaatgccgaa
aacgatattgccgcccgccgctgccgcgagtgcgataccgtgctggttgacccggacgat
atgctgaaagcggcgctgaagctcaaagacgcgctggtgttacgctgcagcggcatgcag
ctgcagcacggggcggatgagaaaggcgaatggctgaaaatcacctatttcgacgaagac
ggtgcggacgtgagcgagcgttttcgtctgcacacccctgcccagcgtacagcgttcgaa
cagctatttatccgcccgcacacccgcacgccgggcgttccactgcgctggataacggcc
gctgatatcgtggcgcaggagcctctgctgcgccatcccgatttcgttgtggcgcgtaag
aaaggccagttctggcaggtccgtgaaaaggtcttcgactacgagggacgcttccgtcgg
gccaatgagttgcgctga
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