Yersinia ruckeri YRB: BD65_3001
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Entry
BD65_3001 CDS
T03611
Symbol
chb
Name
(GenBank) chitobiase
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00511
Other glycan degradation
yru00520
Amino sugar and nucleotide sugar metabolism
yru00600
Sphingolipid metabolism
yru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
BD65_3001 (chb)
09103 Lipid metabolism
00600 Sphingolipid metabolism
BD65_3001 (chb)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
BD65_3001 (chb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
yru03110
]
BD65_3001 (chb)
Enzymes [BR:
yru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
BD65_3001 (chb)
Chaperones and folding catalysts [BR:
yru03110
]
Intramolecular chaperones
Others
BD65_3001 (chb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
AJI96725
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All DBs
Position
3303223..3305904
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AA seq
893 aa
AA seq
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MNKFKLHALAALTATFGFMSAVHASPADQQVVDQLSQLKVNFKMQDNRAAEKGTDCAALG
ADWASCNKTLITLTNTGDKIQGKDWALYFHNIRQVLAVGNDQFKITHVTGDLHKIEPTDK
FSGFPASKTVEIPITGEYWQLFETDFMPRWYATSGDAKPKVLSSTDTENIDQFLTRFTGD
QWKRTKDDNNVLMTPESRFVKNESLKTLPAKSLRGQIVPTPMNVKVHQGDVDLSNGVALE
LSALPKPAEDAVQQRFDMLGVNAKATGFPISTQIKPSAFKGDLAVSGAYELKIGEKGAQV
IGFDPAGVFYGLQSILSLVPTDGIKKIAMLDAKDAPRFEYRALFLDVGRNFKTKQAVLRL
LDQMSAYKLNKFHFHLSDDEGWRIEIPGLPELTDVGSKRCHDLTETTCLLPQLGSGPDSN
NLGSGHFSRSDYIDILKYAKARQIEVIPEIDIPAHARAAVVSMEARYNNLMKQGKEAEAK
EFRLLDPTDDSNTTSVQFYDRKSYLNPCLDSSKRFVDKVIGEMAQMHKEAGMPLQTWHFG
GDEAKNIRLGAGYQDKNGKIEPGKGIIDQSIEDKPWAKSQVCQDMVKQGKVQDVAHLSSY
FAIEVSKLVNAHGIEKMQAWQDGLKDAKGAQDFATKRVGVNFWDTLYWGGADSINDWANK
GYEVIASNPDYVYFDMPYEVNPLERGYYWATRFNDEAKVFSFAPNNMPQNAETSVDRDGN
HFSAKSDKPWPGVTGISGQSWNETVRTDEQLEYMLFPRALPLAERAWHRASWEQDYQAGR
EYKGGETQFVDIKALSSDWQRFANIMGQRELAKLDKAGIAYRLPVPGARIQGGLLEANVS
LPGLAIEYSVDGGKQWQKYDMKVQPKVSGEVMIRSTSPDGKRASRAEVVSSTL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattcaaattacatgcgttagctgcgctgactgcaacttttggttttatgagt
gcggttcacgccagtcctgccgatcagcaggttgttgatcaactgagccaattaaaagtt
aatttcaaaatgcaggataaccgcgccgcagaaaaggggacggattgtgctgcattgggt
gccgactgggcatcatgcaataagacactgattactctgaccaacaccggggataaaatc
caaggtaaagattgggctctgtatttccataatatacgtcaggtgttggcggtgggtaat
gaccaattcaaaattactcatgtgactggcgacttgcacaaaattgagccgactgacaag
tttagtggcttccccgcgagtaaaaccgttgaaattccgattaccggcgaatattggcag
ttatttgaaaccgattttatgccacgctggtacgccacttctggcgatgcaaaacctaag
gttttatccagtactgataccgagaatatcgatcagttcctaacccgctttactggcgac
cagtggaagcgcaccaaggacgataataacgttctgatgacgccagaatcgcgattcgtc
aagaacgagagcctgaaaacattgccagcaaaaagcctgcgtggacagatcgtgccaacg
ccgatgaacgtcaaagtacatcaaggtgatgttgacctgagtaacggtgttgcgctggaa
ctgagtgcgttgccaaaaccggcggaagatgccgtgcaacagcgttttgacatgctgggc
gtgaatgcaaaagctacgggcttcccgatcagcactcaaattaagccttcggcctttaaa
ggtgatttggcggtttctggtgcctatgaactgaagattggcgagaaaggtgcgcaggtt
attggtttcgatccagccggcgtgttctatggcttgcaatccatcctgtcactggttcca
acggatggcattaagaaaattgccatgctggatgccaaggatgcaccgcgttttgaatac
cgtgcattgttcctcgatgttgggcgtaactttaaaaccaaacaggcggtattacgccta
ctagaccaaatgtcagcctataagctgaacaaattccacttccatctcagtgatgatgaa
ggctggcgtatcgaaattcctggtttgccggagttgaccgatgtcggcagtaaacgttgt
cacgacctgacagaaacgacctgtttgttgccacaattgggttcaggtccagatagcaat
aatctcggctccggccactttagccgtagcgattacatcgatattctgaaatatgcgaaa
gcgcgtcagatcgaagttattcctgaaattgatataccggctcatgcgcgtgctgcggtg
gtttcaatggaagcccgttataacaatctgatgaaacaagggaaagaagcggaggcgaaa
gaattccgtctgcttgatccgactgatgattccaacacgacatcagtacagttctacgat
cgtaagagttacctgaacccatgtctggattcctcaaaacgctttgttgataaagtgatt
ggcgaaatggctcagatgcataaagaggccggaatgccgctacaaacttggcatttcggt
ggggatgaagcgaaaaacatccgtctgggtgccggttatcaggataaaaatggcaagata
gagccaggaaaaggcattattgatcagagcatcgaagataagccttgggcgaaatctcag
gtttgccaggatatggtcaaacaaggcaaagtccaggacgttgcgcacttgtccagctac
ttcgctattgaggtcagtaaactggtcaatgcccatggtattgagaaaatgcaggcttgg
caagatggcctgaaagatgccaaaggcgcgcaggattttgctactaagcgtgtgggtgtg
aacttctgggatacgctgtattggggcggtgcggacagcattaatgattgggccaacaaa
ggctatgaagtgatcgcatccaatccggattacgtgtacttcgatatgccgtatgaagtg
aatccactcgaacgtggctactactgggcgacccgctttaatgatgaggctaaagttttc
agctttgcgccgaacaatatgccgcagaatgctgaaacttccgtcgatcgcgatggcaat
catttcagcgccaagagtgacaaaccttggccgggagtcactggcatttcaggccaatct
tggaatgaaactgtacgtactgatgaacagttggaatatatgctcttccctcgagcattg
ccgctggctgaacgtgcgtggcatcgcgcatcttgggaacaggattatcaggctggccgt
gaatataaaggtggagaaacccagtttgttgatatcaaagcattaagctctgattggcaa
cgtttcgccaatattatggggcagcgtgaattggctaaattggataaagccggtatcgct
tatcgcttgccggttccaggcgcacggattcagggaggattgctggaagccaacgtgagc
ttgccggggctggccattgagtattcggttgatggcggcaagcaatggcagaaatatgat
atgaaagtgcagccgaaagtcagcggtgaagtgatgatccgctctaccagccctgatggt
aaacgtgccagccgtgctgaagtggtgagttctacattgtaa
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