Zonotrichia albicollis (white-throated sparrow): 102065352
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Entry
102065352 CDS
T07911
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03013
Nucleocytoplasmic transport
zab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102065352 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
102065352 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102065352 (THOC1)
03041 Spliceosome [BR:
zab03041
]
102065352 (THOC1)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102065352 (THOC1)
Spliceosome [BR:
zab03041
]
Complex C
Other components
EJC/TREX
102065352 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102065352 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
102065352
NCBI-ProteinID:
XP_005490778
Ensembl:
ENSZALG00000007749
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MSPPLFSLPEARLRFTTSTREALINKSIKPLLNAFNQVPGSENEKKCTLDQAFRVVVEEE
IINKAPCENLLAIISLAINGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVAT
WKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEHESTLGQKHTEEREEGMDVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQ
DYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQ
LLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERPPDSKPMRPVRKRPAPEDF
LGKGSNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMVEN
KYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKT
GEDEDEEDNDALLKENNESPEVQRDKAMTGEQIESFASRLGEQWKALAPYLEMKESDIRQ
IELDSEDVKMRAKQLLVAWQDQEGSQATPENLMTALTKAGLGELAESLTNDTEGSS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgctcttcagcctgcccgaggcgcggctccgcttcacgacatccaccaga
gaggctctgattaacaaaagcatcaagccgttgttgaatgcatttaaccaggttcctgga
agtgaaaatgaaaagaagtgtaccttggatcaagcttttagagttgttgtagaagaagaa
ataataaacaaagctccatgcgagaatctcctggcaattatttctcttgctattaatgga
gtcacagaaggtatctgcactgcatcaactccttttgtgcttttgggggatgttctggat
tgcctccctttggatcagtgtgacaaaattttcacttttgtggagaaaaatgttgctacg
tggaaatcgaacacattttactctgcagggaagaattacttgctgcgcatgtgcaatgat
ctcctaagaagattgtctaagtcacaaaacacagtcttttgtggaagaattcagctgttc
ttggctaggttatttccactttcagaaaagtcagggcttaacctacagagtcagtttaac
ctggaaaatgtcactgttttcaataccaatgaacatgagagcactctgggacagaagcac
accgaggagagggaagaaggaatggatgtggaagaaggtgaaatgggagacgatgaagca
ccaacaagttgttccattccaatagattataacctgtatagaaaattctggtctcttcaa
gattattttagaaatcctgtgcagtgctatgagaaggtgtcatggaaaacatttcttaag
tactcagaagaagttctggctgttttcaaaagttacaaattggatgacactcaggcttcc
cgaaaaaagttggaagaactaaaaacaggaggagaacatgtgtattttgcaaagttccta
actagtgaaaagctgatggatttacagctgagtgacagtaacttccgtcgtcacatcttg
ttgcagtacctaatactatttcagtatctaaagggacaagtcaaatttaaaagttcaaac
tatgttctaacagatgaacagtctctttggattgaagatactacaaaagcagtctaccag
cttctttcagaaaatcctccagatggggaaagattctcaaaaatggtagagcatatatta
aatactgaagaaaactggaactcatggaaaaatgagggctgcccaagctttgtgaaagaa
agacctcctgattctaagccaatgaggcctgtgaggaagaggccagctccagaggacttc
ttaggaaaaggatcaaacaaaaaaatccttatggggaatgaggagctgacccgcctttgg
aatttatgtcctgataatatggaagcctgtaaatctgagagtagggaatatatgccaaca
ctggaggaattttttgaggaagctattgaacaagcagaccctgaaaacatggttgaaaat
aagtataaggctgtgaacaattctaactatggctggagagcactgagacttctggcacgt
agaagtccccacttcttccagccaacaaaccaacagttcaagagtttacctgaatatcta
gaaaacatggtaatcaaactagccaaggagctgcctcctccttctgaagaaataaaaaca
ggtgaagatgaagatgaggaagataatgatgctttattaaaggaaaacaatgaaagccca
gaggtgcaacgggacaaagccatgacgggcgagcagattgagtcctttgccagcaggctg
ggggagcagtggaaggccttggccccctacctggagatgaaggagtctgacatccggcag
atcgagctggacagcgaggacgtgaagatgagggccaagcagctgctggtggcctggcag
gatcaggagggctctcaggccacccccgagaacctgatgacggcgctgaccaaggccggc
ctcggggagctggctgagagcctcaccaacgacaccgagggcagcagctaa
DBGET
integrated database retrieval system
