Zonotrichia albicollis (white-throated sparrow): 102066211
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Entry
102066211 CDS
T07911
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zab03009
]
102066211 (DDX55)
Enzymes [BR:
zab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102066211 (DDX55)
Ribosome biogenesis [BR:
zab03009
]
Eukaryotic type
Pre-60S particles
Helicases
102066211 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SHOCT
AAA_22
DUF4050
Motif
Other DBs
NCBI-GeneID:
102066211
NCBI-ProteinID:
XP_026651939
Ensembl:
ENSZALG00000014707
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLS
HFTKHFPMFSQILLIGGRNPMEDVEKFKEQGGNIIVATPGRLEDLFRRKAEGLDLASCVK
ALDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQELESLVRAGLRNPVRI
SVKEKGVAASNTQKTPTRLENFYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYY
GKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQY
DPPSSASVFHATRFALLLPSASKGTECVLGSCSAFVHRCGRTARIGNVGSALVFLLPMEE
SYINFLSINQKCPMQEMKPQTNVLDLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHEC
NLIFRIKDLDFASLARGFALLKMPKMPELRGKCFPDFTPVTVNTDSISFKDKNREKQRQK
KLEELKKEREENQGKKKFVKNKAWSKQKAKREKKKKVTAKRRREEGSDIEDEDMEELLND
TRLLKRLKRGKISEEEFEKKLTGNHRLKAETVEDIDSEG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaaggatgtggctgcggaagccgtcacaggcagtgggaaaaccttggcgttt
gtgattcccatcctggaaatccttctcagacgggaagaaaagttaaagaaaatgcaggtt
ggtgctataatcatcaccccaaccagggagctggccattcagattgatgaggtgctgtca
catttcaccaagcacttccccatgttcagtcagattcttctcattggagggaggaacccc
atggaagatgtggagaagttcaaggagcagggggggaacatcatcgtggctaccccaggc
cgcctggaggatctgttcaggaggaaggcagaggggctggacctggccagctgtgtcaag
gctctggatgtgctggtgttggatgaagctgacagactcctggatatgggctttgaagcc
agcctgaacgccatcctggacttcctgcccaagcagaggaggacagggctgttctcagcc
acgcagacccaggagctggagagcctggtgcgggccgggctgcgcaaccccgtgcgcatc
tcggtcaaggagaagggggtggcagccagcaacacccagaaaaccccaacccgcctggag
aacttctacatgatctgcaaggcagatgagaagtttaaccagttggtgcattttcttcgg
cagcacaaacaggaaaagcatctggtctttttcagcacatgtgcctgtgtggaatactat
gggaaggctctggaatccttaattaagcaggtgaaaataatgagcatccacgggaagatg
aagcacaagagaaacaagattttcacggagtttcggaagctcccggggggcattttggtg
tgcacagatgtgatggcccgtggcattgacattccagaggtgcactgggtgttgcagtat
gacccacccagcagtgccagtgttttccatgccacaagatttgcccttttgctgcccagt
gcttccaaaggcactgagtgtgtgctgggctcttgcagtgccttcgtgcatcgctgcggc
cgcacggcgcgcatcggcaacgtgggcagcgctctggtgttcctgcttcccatggaggag
tcctacatcaacttcctctcaatcaaccaaaagtgtcccatgcaggaaatgaaaccccag
acaaatgtgctggatcttctccccaagctgaagtccatggccctggctgacagggcagtg
tttgagaaagggatgaaagcctttgtgtcctatgtgcaggcttatgccaaacacgagtgt
aacctcatcttccgcatcaaagatctggattttgccagtcttgccagaggttttgcatta
ttaaaaatgccaaagatgcctgaactaagaggaaaatgttttccagactttactccagtc
actgtcaatacagactccatttcgtttaaggataaaaacagagaaaagcagagacaaaag
aaattagaagaactaaaaaaagaaagagaggaaaatcaagggaaaaagaaatttgtaaag
aacaaagcatggtcaaagcagaaagccaagagggagaagaagaagaaagtgacagctaaa
aggaggcgtgaggagggctctgatattgaagatgaggatatggaggagctgctgaatgac
acaagactcttgaaaagattaaaaaggggaaaaattagtgaagaagagtttgagaagaaa
ctaacaggcaaccacaggctcaaagcagaaactgttgaggacatagattctgaaggctga
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