Zonotrichia albicollis (white-throated sparrow): 102067849
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Entry
102067849 CDS
T07911
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102067849 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zab04121
]
102067849 (LMO7)
Ubiquitin system [BR:
zab04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
102067849 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
PDZ
LIM
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
102067849
NCBI-ProteinID:
XP_026649549
Ensembl:
ENSZALG00000008985
LinkDB
All DBs
Position
Unknown
AA seq
1504 aa
AA seq
DB search
MHDSHKDDRSYRRISVIEPKPTTDFNRFLPNKNKQTAYVPAPLRKKRTEKNEDNRRSWAS
PVFTESDGAFSSNQRRQRQLDTKGENKPRVNSPSQLSGYCDEDEEEVGIPNIEKDDLYIR
KLSSSAPNTVVAFDKFLPKFWTPEEELLWKNIKKSSFKPWYKEIQGFSRKRSDSEDEEFA
YKQSYTIVANQPRPSFDWNSSCRRDQNYKPTAEYVGRSLSQIAEGKILESPDQPSQFSLL
QALQKYTDYVSSEMETRIDPTSGPRLIKCRKNVSFIPGGKQGDEENGYLYPDLENDDLFV
RKTGAFHVNQVVLQDPRYLKKFSEQEPPLEGEIILQPREGQTVLPDLEKDDMIFRKVLSQ
KKEVPLSGAPDKYHPALFPDPWSLPEEIRSKFLCLLEKNAIPEERKSNGRVLSPSLHHKK
DDMLTRKIESWKVGSNVQPVNFIPGPCSEEDWKKWEAIREASKVRHKKRQMVERLFQKLS
DEQGSKSLNDVSAEELQTLRKIRYEELQKIKEQLQEQDLKWQEDLAKWKSRRKSYTSELQ
KKKEEREEIERRASEVSGRSTKSLKDMQQEREDRDQESYEQQKQEHNWASSLNDDDVFSE
DKAPSTAAEDWSATKDHRLEEDASHSTRDSKSVYTTQPPKESLPESSAAREAPAPPESLE
REQSPVLLSTRYSVNAQTGSAQVSASLPRTYQKTDTSRLTSVVTPRPFGVHSRGISSLPR
SFTMDDAQKYNGEVEKAKRTQTLFTSFSQPESAHPLSTGAFRSRGEEEEEEKGVQSTPPP
SLALPLKPQDQDAGSSIPKPEYGIPPDSLSLASSAETATLTEPKDSKSMEQYSEMRISIN
QRPGHSRSFGFTTNWSSSGAIVQTVEEGSPAALCQLHVDDEIIAVNGTKVSHMDHSQWEE
AINRALETGNLVMDVRRYGKNGTSENKWIDATSGEKVSNASTISTKRDFSSSLQSSDTET
KLINGMQGDLGSNEQRASEPISLKNLKRRSQFFEQGGPEPAMPDLPVPSISAPSRRVWDQ
EEERKRQEKWQKEQDRLLQEKYQREQEKLREEWLRAKQEAEKESSKYFDEEQTVLTLNTT
SITSQAPPVSSWTASPEADAPKEPERDGENELAASLLHEEEGRRRLQEERRTQEEATRHF
EQEQELQELELERQRKEREQQQAEEQRRQAELEEQRRQAEKQREVSVEVPQYQRHYERYE
VSKTIEDRAGHPVIDRHYERYEISKTIEAQPGQSFADRNKSKSTTELNEVNTIRNGTQSK
YSERSWNMGESQKKPQKEQNLSAAELERQQILQEMRKKTSLHTDSSWIRQRSASIHKEPI
SLYSSSMRRGESLDNLDSSGMRSWRHHSRLNQSASSLSLSSSQDSSRPVSTSNRAYMCTP
SSSKAPPVATSARAPSTSQTAPRAQSPLSASQSGSQTRSRSVSGKKICSYCNNILGKGAA
MIIESLGLCYHLHCFKCVACGCDLGGSRSGAEVRIRNNKLFCNDCYIRFKSTSSGGIDLL
TDLN
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactcccataaagatgacaggtcttaccgcaggatttcggtgattgaaccaaaa
cctaccactgacttcaaccgtttcttacccaacaaaaacaagcagacagcatatgtgcca
gcacctttaaggaagaagaggacagagaagaatgaggacaacaggaggagctgggcaagt
cctgtttttaccgagtcagatggagcgttttcaagtaaccagaggaggcagaggcaattg
gatactaaaggcgaaaacaaaccaagagttaacagtccttcacaattatctgggtattgt
gatgaggacgaggaagaagtaggcatcccaaacattgaaaaagatgatctctatattcgc
aagctaagttcttcagcgccaaatacagttgttgcttttgacaaatttcttcctaagttt
tggactccagaggaggaattgctatggaaaaatatcaagaaatcctctttcaaaccctgg
tataaagagattcaagggttcagtagaaagagatcagattctgaagatgaggaatttgct
tacaaacaaagctatactattgttgctaatcaaccaagaccaagttttgactggaacagt
agctgcagaagggatcagaattataagccaactgctgaatatgtgggaaggtcattgtca
cagattgcagaaggaaaaatcttggagtctcctgatcagcccagtcagttttcgttactt
caggccctgcaaaaatacactgactacgtgtcttctgaaatggagaccagaattgatccc
acttctggccctaggctcataaaatgtagaaagaatgtttcctttataccaggaggcaag
caaggagatgaggagaatggatatctatatccagatttggaaaatgatgatttgtttgtt
cggaaaactggggctttccatgtgaatcaagttgttcttcaagacccccggtatttaaag
aaattctctgagcaggagcctcctctagagggtgagataattctgcaacccagagagggc
caaactgtgcttccagatttggaaaaggatgacatgatttttcgtaaagtcctctctcaa
aaaaaagaggtgcctttatcaggtgctcccgacaagtatcacccagcactgtttcctgat
ccgtggagtcttccagaagagatacggtccaaatttctatgtttacttgaaaaaaatgcg
ataccagaggaaaggaagagcaatggcagagtgctgtcgccatctttacaccataagaag
gacgatatgctgacccgcaagattgaatcttggaaagtgggaagcaacgtccagccagta
aattttatcccaggtccatgcagtgaagaagactggaagaagtgggaagcaatcagggag
gccagcaaagttagacacaagaaacggcagatggtggagagactgtttcaaaagctttct
gatgagcaagggagtaaatctttgaatgatgtcagtgcagaggagctgcagacactgcgc
aaaatccgttatgaagagctgcagaagataaaagaacagttacaagagcaagatctaaag
tggcaagaagatctagcaaaatggaagagtcgtagaaagagttacacttcagaattgcaa
aagaaaaaggaagagagggaagaaattgaaaggagagcctctgaagtgtctggaaggagt
accaagtcactgaaggatatgcagcaggagagggaagacagagatcaagagtcctatgag
cagcagaaacaggagcacaactgggcgtcctcactgaatgatgatgatgtgttcagtgaa
gacaaagcaccttccacagcagcagaagattggtcagcaaccaaagatcaccgtttggag
gaagatgcttcccacagcactagggacagtaaaagtgtgtacaccacccagcctcccaag
gagagcctgcccgagagctcagctgctcgagaagctcctgctcctccagagagcctggag
cgggagcagagcccggtgcttttgtccactcgttactcagtgaacgctcaaactgggtca
gctcaggtttcagcttctctcccgagaacttaccagaaaaccgatacctccaggttaaca
tctgtggttacaccaagaccttttggtgtccactcaagaggaatctcgtcacttccacgg
tcgttcacgatggatgatgctcagaaatacaatggagaagtagaaaaagctaaacgaact
caaactttgttcaccagcttttcacaaccagagtctgcacaccctctctccactggtgca
ttcagaagcagaggtgaggaggaagaggaggaaaaaggtgttcagtcaacacctcctccc
agtttggcattacctttaaagccccaagaccaagatgctggaagtagtattcctaagcca
gaatatggcattcctcctgattctctttcacttgcatcttctgcagaaactgcaactctg
acggagcctaaggattcaaaatccatggaacagtacagtgaaatgagaatcagtataaac
cagagacctggccacagtcgcagctttgggtttacaacaaattggagttcttcaggagcc
attgtacagacagttgaagaaggcagccctgcagcactttgtcagctgcatgtagatgat
gagatcattgctgtcaacggcacaaaggtttcccatatggaccacagtcagtgggaagaa
gccatcaacagagcactagaaactggaaacctggtcatggatgtcagacgatatggaaag
aatggtacatctgaaaataaatggattgatgcaacttcgggagaaaaagtttcaaatgct
tccaccatatccacaaaaagagatttctccagcagccttcaaagttctgatacagaaaca
aaattgataaatggaatgcaaggagatcttggctctaatgaacaaagagcatctgaacct
atttctttgaaaaacttaaaaaggcggtcacaattttttgaacaaggaggcccagagcct
gcaatgcctgatctcccagttccctccatcagtgctcctagccgtcgggtttgggatcaa
gaggaagagcgaaaacgacaggaaaaatggcaaaaagagcaggaccgtttgttgcaggag
aaataccaacgagaacaagagaaactgagggaagaatggctacgagctaagcaagaagcg
gaaaaagagagctccaagtattttgatgaggaacagactgttctaaccctaaatacaaca
tctatcacttctcaggctccacctgtgtccagctggacagcaagcccagaagcagatgct
cccaaggagccagaacgagatggagaaaacgagctggcagcgagcttgctgcatgaggag
gaaggaaggaggaggcttcaggaggaacggaggacccaggaagaagctaccaggcatttt
gagcaggaacaggaactccaagagctggagctggagagacagcgtaaagagagggagcag
cagcaggctgaggagcagaggcggcaggcggagctggaggagcagaggcggcaggcggaa
aagcagagggaggtgtcagtggaggtgcctcagtaccaaagacattacgagcgctatgaa
gtatctaaaacaatagaggatagagctggccatcctgtcattgacagacattatgagcgt
tatgaaatttctaaaaccattgaggcgcagcctggccagtcgtttgctgacaggaataag
tcaaagtcaactacagaactgaatgaagtcaacacaatcagaaatggtacccagagcaag
tattcagagaggtcctggaacatgggtgagtcgcagaagaaacctcagaaggagcaaaac
ctgtctgcagcagagctggagagacagcaaatccttcaggaaatgagaaagaaaacatct
ctacacacggacagcagctggattaggcagcgcagtgccagtatacataaggagcccatt
agtctgtacagcagtagtatgaggagaggggagtctttggacaatcttgattcttcagga
atgaggtcatggaggcaccactcacggctgaaccagtctgcatcctctttatctctatct
tctagtcaagattctagtcgcccggtgtccacctcaaaccgagcctacatgtgcactcct
tcctccagcaaagcacctcctgtggccacctctgcaagagccccctccacatcccagaca
gctcccagggctcagtctcccctctctgcttcccagtcagggtcccagacacgcagcagg
tcagtcagtgggaagaaaatctgttcatactgtaataacattctgggcaaaggagcagcc
atgatcattgagtctcttggtctttgttatcatttacattgctttaagtgtgttgcctgt
ggatgcgaccttggtggatcccgctctggagctgaagtcaggatccgaaacaacaaactc
ttctgcaacgactgctatatcagatttaaaagtacaagttcaggaggaattgatttactt
acagatcttaattaa
DBGET
integrated database retrieval system
