Zonotrichia albicollis (white-throated sparrow): 102069344
Help
Entry
102069344 CDS
T07911
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102069344 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zab03400
]
102069344 (LIG4)
Enzymes [BR:
zab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102069344 (LIG4)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
102069344 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Tox-REase-9
Motif
Other DBs
NCBI-GeneID:
102069344
NCBI-ProteinID:
XP_005487307
Ensembl:
ENSZALG00000017284
UniProt:
A0A8D2NHA5
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MASAPVSQPSPKKTVASHVPFADLCSTLERIQKSKTRPEKTKYFKDFLDSWRKFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLSLPKDGKDAAKLLNYRTP
MGSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNVAKNKGQLKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMSNQTFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASSLEGSLTPFIHNVFKSNIQNCILDGEMMAYNPEAQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTPVKGRIHVVPKRSARTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAVAETPPPNEKPTIFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPP
GNILCGAEKPEMYIEPCNSVIVQIKAAEIVDSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEDLRSKAQGKLASKHLRIDEYDEPHEKKRKTVSKVRKVIGIAEQFKAPDLSSVSKV
SNVFEDVEFCVMTGMGKYSKSELESRIAQCGGSVVQNPGPETYCVIVGAENVRVKNIIAS
NKYDVVRAEWLLQCFQTKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTANTDVVQLK
EVFSRMKDKMAMPLDLIAELEERYWCSSCQLGIFRGSTIYVDCYAVVNEPQSKIPGTTLS
IRALELRFYGAKVVSHLEEGVSHVVVGEDCSRVEEMKALRRTFGKKFKIVSELWVTHSVE
EGVAKNENQYII
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcacctgtttcacagccttctcctaaaaaaacggtggcctctcacgtgcct
tttgcagatctctgttctactctggagcgaatacagaagtccaaaactcgtccagagaaa
accaagtatttcaaggattttctggattcctggaggaaattccatgatgcactccatcaa
aaagagaaagatgtcacagattccttttacccagctatgcggcttattctcccacagttg
gaaagagaaaggatggcatatggaattaaagaaactatgcttgcaaagctctatattgaa
ctgcttagtttaccaaaagatggaaaagatgctgcaaagcttttaaattacagaacgcct
atgggctcacgtggagatgctggagattttgcaatgatcgcctactttgtgctaaaacct
aggagcccaaaacaaggcagactgacaatagaacaagtcaatgaacatttagatgcaatt
gctaataataatgttgctaaaaacaagggtcagttaaagaaaagtcttctgcagttaatt
acccagagcacagcactagaacaaaaatggcttatccgaatgattataaaggatctaaag
cttggtgttagtcagcaaactatattttcaatttttcatcctgatgctgctgaattgcac
aatgttactactgatttggaaaaagtttgcagacaattgcatgatccctctgtctcactt
agtgatgtttctatcatgttgttttctgcctttaaaccaatgcttgctgctattgcagat
gtccaacaaattgagaaacaaatgagtaaccagacattctacatagaaactaagctggat
ggtgaacgtatgcagatgcacaaagatggggatgtgtacaagtatttttcccgaaatggg
tttgactatacccagcagtttggtgcttcatcccttgaaggttcattaacgccatttatt
cataatgtatttaagagcaatatacaaaattgcattcttgatggtgaaatgatggcttac
aatcccgaggcacaaacgtttatgcaaaaaggaaacaaatttgacataaaaagaatggtg
gaggactctgatctgcagacctgcttctgtgtatttgatgtattgatggttaatgatcag
aagttggggcatgaagtactcagcaaaagatatgaaatcttaagtagtgtatttaccccg
gtgaagggcaggatacatgttgtccctaagagaagtgccagaacaagaaaagaagtaatt
gatgccttaaatgaagccatagataacagagaagaaggaattatggtgaaagatcccatg
tccacgtacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatatgtc
aatggactgatggatgagctggaccttttaattgttggtggttactgggggaaggggtct
cgtggtggaatgatgtctcatttcctatgtgctgttgcagagacgccgcctccgaatgaa
aagccgaccattttccactccatttgtcgtgttggctctggctataccatgaaagagttg
tatgatctaggcttgaaactggccaaacactggaagccctaccataggaaggacccacct
ggtaacattttgtgtggagctgaaaaacctgaaatgtacattgaaccttgcaactctgtc
atagttcagatcaaggcagctgagattgttgacagtgatatgtataaaaccgactgtact
ttgagattcccccgaattgagaagataagggaagacaaagaatggtatgagtgcatgact
tcagacatgctagaagacctcagaagcaaagcacaaggaaagctggcatctaagcacctt
cgtatagatgagtacgatgagccacatgagaaaaaaaggaaaactgtttcaaaggtgagg
aaggtaattggaatagctgagcaatttaaagctcctgatctttctagtgtaagcaaggtt
tcaaatgtatttgaagatgttgagttttgtgttatgacaggaatgggaaaatactcaaag
tctgagctggaaagcagaatagcccaatgtggtggcagtgtggtacagaacccggggccg
gagacttattgtgttattgtaggagctgagaatgtcagagtgaaaaacatcattgcttcc
aacaaatacgatgtggtgagggcagagtggctccttcagtgttttcaaaccaaaatgctg
gtgccttggcaaccagcctttatgattcacatgtctcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagctacacagcaaacacagatgttgtgcagctcaag
gaagtgttctcaagaatgaaagacaaaatggcaatgcctctggacttgattgcagagcta
gaagaacgttattggtgtagcagttgtcagcttggtatattcagaggaagcactatttat
gtggactgttatgctgttgttaatgagccccaaagcaaaatccctggaactacactttca
attagagctttggagctccgtttttatggtgcaaaagtagtttctcaccttgaagagggt
gtctcccacgttgttgtgggagaagattgttcacgggtagaagagatgaaagcactcaga
agaacatttgggaaaaaatttaaaattgtatccgagctgtgggtaacacactcagtggag
gaaggagtcgcaaagaatgaaaatcagtacataatttaa
DBGET
integrated database retrieval system
