Zonotrichia albicollis (white-throated sparrow): 102070764
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Entry
102070764 CDS
T07911
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03013
Nucleocytoplasmic transport
zab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102070764 (UPF3B)
03015 mRNA surveillance pathway
102070764 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102070764 (UPF3B)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102070764 (UPF3B)
mRNA cycle factors
P-body specific factors
102070764 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
102070764
NCBI-ProteinID:
XP_005484494
Ensembl:
ENSZALG00000018233
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MKEDKENARPKERRGASAGPSVLLPAGPGSGPAAGTDGRAGTAELDRLERPKDKKETLSK
VVIRRLPPSLTKEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLFRD
RFDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSADDE
KLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEE
RRKWKEEERRKRKEAEKLKKVDRCPEKERDRSKEEPKIKLLKKPEKDEKDLERKEKSKKL
ERETLREEKNASSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDFDRDREYERAQRERL
RRQEEERRRQKERYEKEKVFRRKEEEVKKERDLLREKGKKSDLTDFTSSTDKSEKVTKDD
KKEDTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDNAAKPPDQGVEKKQEGESSHTKE
EE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggagaacgccaggcccaaggagcggcgcggggcctccgccgggccg
agcgttctgctgcccgcgggaccgggctcgggccccgctgccggcacggacggcagagcc
ggcacggccgagctcgatcgcctggagcggcccaaggacaagaaggagacgctcagcaag
gtggtgatccgccggctgccgcccagcctgacgaaggagcagctggaggagcacctgcag
cctctgcccgagcacgactacttcgagttcttcgccaacgactccagcttgtacccgcac
atgttctccagagcctacatcaacttcaagaaccaggaggacatcgtcctcttcagggat
cgcttcgacggctacgtttttgtcgatcacaaaggtcaggaatatgctgccatagttgag
tttgcacctttccaaaaagctgcaaaaaagaagagtaagaaaaaggatgccaaaactgga
actattgaagatgatccagaatacaagaagtttttggaaagttacagtgcagatgatgaa
aaattaacctccactcctgaaactttgttggaggaaatagaggcaagaaacaaagagcta
atagctaaaaagactactcctttattgaacttcttgaaaaacaaacagagactgagagaa
gaaaaaagagaggagaggaggaggagagaattagaaagaaaaagacaaagagaagaagaa
agaagaaaatggaaagaagaggagagaaggaagagaaaagaagcagaaaaattgaagaaa
gtagacagatgcccagaaaaagaaagagacagatcaaaagaagaaccaaagattaagcta
cttaagaagcctgaaaaagatgaaaaagacttggagagaaaagaaaagtccaagaaactg
gaaagagagactctgagggaggaaaaaaatgcgagtagtgcatctgccaaacgatctgat
ggggagacaaaagaagagaaggcaaaaaaatcagaagatgagtgtgtaaaggactacagg
gaccgagatagagattttgacagagacagagaatatgagagagcacagagagagagactg
aggcgccaagaagaggagcgtcggaggcagaaagagcgctatgagaaagagaaggttttt
agaagaaaagaggaagaggtgaaaaaggagagagacttactcagagaaaagggaaagaaa
agtgatcttacagactttaccagcagcacggacaaatctgagaaagtaaccaaagacgat
aaaaaagaggatacaattaagagggatcgtatcagaaacaaggatcgcccagcaatgcag
ctgtaccagcccggagcccgaagccggagcagattgtgtcagtatgaagacaatgctgca
aaacccccagatcagggagtggaaaagaaacaagagggtgagagcagtcacacgaaggaa
gaggagtga
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