Zonotrichia albicollis (white-throated sparrow): 102074472
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Entry
102074472 CDS
T07911
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03013
Nucleocytoplasmic transport
zab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102074472 (UPF3A)
03015 mRNA surveillance pathway
102074472 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102074472 (UPF3A)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102074472 (UPF3A)
mRNA cycle factors
P-body specific factors
102074472 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
102074472
NCBI-ProteinID:
XP_026649855
Ensembl:
ENSZALG00000006881
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MRSEREAGQGQGLGLGSGRGGGRDSRPMDAPLLQESPRCDTEAPPKPPPTSPPSPLPLPP
PLHPAPGKQREEKKTALSKVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHL
YSRAYINFRNPEDILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKSGS
IEDDPEYRKFLENYCADEDKICANPEILLGEIEAKTRELIARRTTPLLDYIKNRKLEKQR
IREEKREERRRRELEKKRLREEEKRKRREEERRKRKEVEKQKKISEKEIRIKLLKKPEKG
DELASEKHKGEEADIEENKWDKSPGSGSIKSKSLESSLKEIKEKSQNDSDKEQRDLERRF
REKEPERQRYRLDDGRKHRTHYEFDKFMRRNEEELKWGKGYDQDRGKKGNYNYSFTVEAV
DKLGKEDKCDDMASKKERIRNKDRPAMQLYQPGARIRTHMGPTSKTYDCSGKPFEDALDK
KYEADNSAGASSEKTEETE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggagcgggaggcagggcaggggcaggggctggggctgggctcgggccggggc
ggcggccgcgactcgcgacccatggacgccccgctgctgcaggagtcgccgcgctgcgac
acggaagctccgccgaaaccgccgccgacgtccccgccgtccccactgccactgccgccg
ccgcttcacccggcgccggggaaacagcgggaggagaagaaaacggcgctgagcaaagtg
gttattcgaaggcttcctccttgtctaaccaaggagcaacttgaggagcagctgcatcct
ctacctgcccatgattattttgagttttgcactgctgatcccagcctttatcctcatctc
tactcaagagcatacattaactttagaaatcctgaggacatccttctttttagagatcgc
tttgatggctatgtcttcattgataataaaggtttggaatatcctgcagtggttgaattt
gcgccatttcagaagatttcaaaaaagaagctgaagaagaaagatgccaaatctgggagc
attgaagatgatccagaatataggaaatttttagagaattattgtgctgatgaagacaag
atctgtgccaatcctgagattcttttgggagagattgaggccaaaacaagggaactcatt
gctagaagaacaacaccccttttggattatattaaaaatagaaaattagaaaagcagaga
attcgagaagagaaaagagaagaacggaggcggagagaattggagaagaagcgtttgcgg
gaggaagagaaaaggaagcgcagagaagaagaaagacgtaaaagaaaagaagtggagaag
caaaagaagatttctgaaaaagaaataaggatcaagcttctcaagaagcctgaaaaagga
gatgagctggccagtgaaaagcacaaaggtgaagaagctgacattgaggaaaataaatgg
gataaatcacctggatctgggagtataaaatccaaatctttggagagttcactaaaagaa
attaaggaaaagtcacaaaatgatagtgacaaagagcaaagagatttggagagaagattt
cgagaaaaagaacctgaaagacaaaggtatcgattggatgatggcagaaagcatagaact
cactatgagtttgacaagtttatgagaaggaatgaagaagagctgaaatgggggaaagga
tacgaccaagacagaggaaagaaagggaactacaactacagcttcactgtggaggcagta
gacaaactgggtaaagaggacaagtgtgatgacatggcatccaaaaaggagcgcataaga
aataaggatcgtccagccatgcagttgtaccagccaggagctcgcatccgaacacatatg
ggacctacaagtaaaacctatgactgcagtgggaaaccctttgaagatgctcttgataaa
aagtatgaggcagataattcagctggagctagttctgaaaagactgaagaaacagaataa
DBGET
integrated database retrieval system
