Zalophus californianus (California sea lion): 113908157
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Entry
113908157 CDS
T07874
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zca03009
]
113908157 (DDX52)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113908157 (DDX52)
Ribosome biogenesis [BR:
zca03009
]
Eukaryotic type
90S particles
Helicases
113908157 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
P-loop_SecA
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
113908157
NCBI-ProteinID:
XP_027424011
EnsemblRapid:
ENSZCAG00025022780
UniProt:
A0A6J2AYX3
LinkDB
All DBs
Position
16:23776577..23798989
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AA seq
531 aa
AA seq
DB search
MDAHDLFRRLGVGAKFDVRRFSADAARFQVGKRKHDFDSSEVLHRRDFFGNKKSAPGECG
ASRTHQELKDEEKKEESLTEKKREQSKKKRKMMMSEITSQEEGSTIQWISSIEAKIEDKK
IKRDTKLTSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNI
LDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALII
SPTRELANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLL
KQDPPGIDLTRNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERAKEL
FHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYD
FPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKL
LSKQKKKMIKKPLERESISTTPKYFLEKAKNKQKKVTGQNSKKKVALEDKS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctctttcgccggcttggtgtgggggccaaattcgacgtgagacgt
ttctctgcggacgcagcgcgattccaggtaggaaaaaggaaacatgactttgattcttca
gaggtgctgcacagacgggacttctttggaaacaagaagtctgctccaggtgagtgtgga
gcatcaagaactcatcaggagcttaaagatgaagagaaaaaagaagagagcctaactgaa
aagaagagggaacagagcaagaaaaagaggaaaatgatgatgtcagaaattacttctcaa
gaagaaggttctactatacagtggatatcatctatagaagcaaagattgaagataaaaaa
attaaaagagatactaaactaacttcaggaaagttggagaatctcagaaaagaaaagata
aacttcttccggaataaacacaaaattcatgtccaaggaactgatcttcctgacccaatt
gctacatttcagcaacttgaccaggaatataaaatcaattctcgactgcttcagaacatt
ctagatgcaggcttccagatgcctacaccaatccaaatgcaagccattccagttatgttg
catggtcgagaacttctggcttctgctcctactggatctggaaagactttggcttttagc
attcccattttgatgcaactaaaacaacccacaaataaaggcttcagagctctgattata
tcaccaacacgagaacttgccaaccagattcacagagagttagtaaaaatctcggaggga
acaggattcaggatacacatgatccacaaagcagcagtggcagccaagaaatttggacct
aaatcatctaagaagtttgatattcttgtgactactccaaatcgactaatctatttatta
aagcaagatcctccaggaatagatttaacaaggaattctgcagtagagactgtagaacaa
gagcttctctttgttgggtctgagactgggaaacttctggccatgagagaacttgttaaa
aagggtttcaatccacctgttcttgtttttgttcagtccattgaaagggctaaagaactt
tttcatgagctcatatatgaaggtattaatgtagatgttattcatgcagacagaacacag
caacagagagataacacagtccacagcttccgagctggaaaaatctgggttcttatttgt
acagccttgctggcccgagggattgattttaaaggtgtgaacttggtgatcaactatgac
tttccaaccagttcagtggaatacatccacaggataggtcgaactggaagagcagggcat
aaaggaaaagctgttacttttttcactgaagatgataaaccattattaagaagtgttgct
aatgttatacagcaggccggatgtcctgtgccagaatacataaaaggtttccaaaaacta
ttaagcaaacaaaagaaaaagatgattaagaagccattggaaagggagagcattagtaca
actccaaaatatttcttagaaaaagctaagaataaacagaaaaaggtcactggtcagaac
agcaagaagaaagtagctcttgaagacaaaagttaa
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