Zalophus californianus (California sea lion): 113917254
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Entry
113917254 CDS
T07874
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zca04040
]
113917254 (SCN10A)
Ion channels [BR:
zca04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113917254 (SCN10A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
GPHH
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
113917254
NCBI-ProteinID:
XP_027440751
EnsemblRapid:
ENSZCAG00025008644
UniProt:
A0A6J2CBN2
LinkDB
All DBs
Position
1:complement(67274927..67367955)
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AA seq
1959 aa
AA seq
DB search
MELPFGSLETTNFHRFTPESLVEIEKRIAAKQAAKKAKDKYREQKDQEEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVGMTQTELPEGIEYVFTVIYTFEALIKILARGF
CLNEFAYLRDPWNWLDFSVITLAYIGEATDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCATLNETGNYSSYGKPDF
YYNKPGTSDPLLCGNGSDAGHCPQGYLCLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKK
FQEALEMLRKEQEVLAALGIDTASLHSHNGSPLASKNASERKRRMRPRVSEGSTDDNKSP
QSDPYNQRRMSFLGLTSGRRRASHGSVFHFRAPCLDTSFPDGVTDDGVFPGDRESHRGSM
LLGGGAGQQGPFLRSPLPQPSNPGPGHGEDRHSTLSTGELAPGGIEVLAFDAGQKKTFLS
AEYLNEPFRAQRAMSVVSIMTSVLEEFEESEWRCPPCLTSLAQKYLIWECCPMWVKLKML
LFGIVTDPFAELTITLCIVVNTVFMAMEHHGMSAAFEAMLHIGNIVFTVFFTAEMVFKII
AFDPYYYFQKRWNIFDSIIVTVSLIELGAAKKGSLSVLRTFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRHNISAPNEEWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LAAPDEDGEVNNLQVALARIQAFGHRTRKAIRSFFTRPCLLPWPKTEPQLVVKLPLSSSK
AENHIAAGAAVGSPGGLPVSRSPRDDHNDFITNPNIWVSVPIAEGESDLDDLEEDGEEEP
RSSQQEVIPQGQQEQLQQVGRSEGHLAPRSPGSGMSSEALASHAGEKWKDEAAVQAPAEG
GDETSSSEGSTVDCLDPEEILRKIPELADGLEEPDDCFTEGCLHHCPCCKVDASKFPWAM
GWQVRKACYRIVEHSWFESFIIFMILLSSGSLAFEDHHLDQKPTVKALLEYTDRVFTFIF
VFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKILQYSDVASIKALRTLRALRP
LRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGKFGRCINKTNEY
LSLVPLSIVNNISDCKDQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAV
DARDVNLQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIVIMVLICLNMITMMVET
DEQSEEKTKILNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFIVVVLSIGSLIFS
VILTSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYSIFGMASFPHVSWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPY
CDPNLPNSNGSRGNCGNPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATQESSEPLS
EDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLVPGDK
IHCLDILFAFTKNVLGESGELDSLKANIEEKFMATNVSKTSYEPIATTLRWKQEDISATV
IQKAYRSYVLHRSVTISNPPGVLRAEEEAVSPPGEAFAVFMANENCTLPDKSETASTTSF
PPSYDSVTRGLSDQVNMSTSSLMQNEDEATNKKAIAPGP
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggaactcccctttgggtccctggaaactaccaacttccatcgattcactccggagtcc
ctggtggagattgaaaagcgaattgctgccaagcaggcagcaaagaaagccaaagataag
tacagggagcagaaggaccaagaagagaagcctcggcctcagctagacttgaaagcttgc
aaccagctgcccaagttctatggtgagctcccggcagagctagttggggagcccctggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaaggaaggaca
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattaca
gtcactattttggtcaattgtgtgggcatgacccaaactgagcttccagaaggaatcgag
tatgtcttcactgtcatttacacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagtttgcttacctgcgagatccttggaactggctggattttagtgtcatt
accctggcatacattggtgaagcgacagatctccgagggatctcaggcctgcggacattc
agagttcttagagctttaaagacagtttctgtgatcccaggactgaaggtcattgtggga
gctctgatccactcggtgaggaaactagcagatgtgaccatcctcactgtcttctgcttg
agtgtctttgccctggtgggtctacagctcttcaagggcaatctcaagaacaaatgtgtc
aagaattgtgcaactctcaacgaaacgggcaattactcctcttacggaaaaccagatttc
tactataataagcctggcacttcagatcccttactgtgtggcaatggatctgatgcaggc
cactgccctcaaggttatctctgtcttaaaacatctgacaacccagattttaactacacc
agctttgattcctttgcttgggctttcctgtcactgttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcttctgggaaaatgtatatggtctttttc
gtgcttgtcatcttcttggggtctttctacctggtcaacttgatcttggctgtggtcacc
atggcatatgaggagcagaaccaggcaacaattgacgaaattgaagccaaggagaagaag
ttccaagaggcccttgagatgctccggaaggagcaggaggtgctggcagcgctagggatt
gacacagcctctctccattcccacaatggatcacctttagcctccaaaaatgccagtgag
agaaagcgcagaatgagaccaagggtgtcagagggctccacagacgacaacaaatcaccc
caatctgatccttacaaccaacgcagaatgtctttcctaggcctcacctctgggagacgc
cgggctagccatggcagtgtgttccatttccgtgccccttgcctggatacctcattccct
gatggagtcacagatgatggagtctttcctggagaccgtgagagccatcggggctccatg
ctcctgggtggaggtgctggccagcaaggccccttccttaggagtccactgcctcaaccc
tccaaccctggcccaggacatggagaagacagacactccacattgtccaccggtgagctt
gcccctgggggcatcgaagtcttggcatttgatgcaggacagaagaagactttcttatca
gcagaatacttgaatgaacctttccgagcccaaagggcaatgagtgttgtcagcatcatg
acctctgtccttgaggaattcgaggagtctgaatggaggtgcccaccctgcttgaccagc
ttggctcagaagtatctgatctgggagtgctgccccatgtgggtgaagctcaagatgctt
ctctttgggattgtgacggacccctttgcggagctcaccatcaccttgtgcattgtggtg
aacacagtcttcatggccatggagcaccacggcatgagcgccgccttcgaagccatgctc
cacataggcaacattgtctttactgtgtttttcactgctgaaatggtcttcaaaatcatt
gccttcgacccctactattacttccagaagagatggaacatctttgacagcatcattgtc
actgtgagcctgatagagctgggtgcggccaagaaggggagcctgtcagtgctgcggaca
ttccgcttgctgcgggtcttcaagctggccaagtcttggccaaccttaaacacgctcatc
aagatcatcgggaactcggtgggggcactggggaacctcaccatcatcctggccatcatt
gtctttgtcttcgctctggtgggcaagcagttactcggggataattaccgggacaaccgg
cataatatctctgcacccaacgaagaatggccgcgatggcacatgcacgacttcttccac
tccttcctcattgtcttccggatcctatgtggagagtggattgagaacatgtgggcctgc
atggaagttggccagaaatctatatgcctcatccttttcttgacagtgatggtgctaggg
aacctggtggtgctcaacctgttcatcgccctgctgctgaactccttcagtgctgacaac
cttgcagctccagatgaagatggggaggtgaacaacctgcaggtcgccctggcacggatc
caggcttttggccatcgtaccaggaaggccattcgcagcttcttcaccaggccttgcctg
ctgccctggcccaagacagaaccccagctggtggtgaagctcccactctccagctccaaa
gctgagaaccacattgctgctggtgcagctgtggggagccctggagggcttccagtgtcc
agaagccccagggatgaccacaacgatttcatcaccaatcctaacatatgggtctctgtg
cccattgccgaaggtgaatctgacctcgatgacctggaggaggatggtgaagaggaacct
cggagctcccagcaggaagtgatccctcaagggcagcaggagcagctgcagcaagttggg
aggtctgagggccacctggcacccaggagcccaggctctggaatgtcctctgaggccctg
gcttcccacgcaggtgagaagtggaaagacgaggctgctgtccaggcccctgcagaggga
ggggatgagacaagctcctcagaaggcagcacagtggactgcctggatcctgaggagatc
ctgaggaagatccctgagctggcagacggccttgaagaaccagatgactgcttcaccgaa
ggctgtcttcaccactgtccctgctgtaaagtggacgccagcaagttcccatgggccatg
ggctggcaggtgcgcaaggcctgctaccgcattgtggaacacagctggtttgagagcttc
atcatcttcatgatcctgctcagcagtgggtctctggcctttgaagaccatcaccttgac
cagaagcccacagtgaaggctttgctggaatatactgacagggtgtttacatttatcttt
gtattcgagatgctgctcaaatgggtggcctatggcttcaaaaattacttcaccaatgcc
tggtgctggctggacttcctcattgtgaacatctccctgacaagccttatagcgaaaatc
ctgcagtattctgatgtggcatccatcaaagcccttcggaccctccgtgccctgaggccc
ctgcgggctctgtctcgattcgaaggcatgcgggtggtggtagatgccctggtgggtgcc
atcccatccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttcagcatc
atgggtgtgaacttctttgcggggaagtttgggcggtgcatcaacaaaaccaatgagtac
ctttctcttgtgcctttgtctattgtgaataacatatctgactgtaaagatcagaaccac
actggcagcttcttctgggtcaacgtgaaagtcaactttgataatgttgcaatgggttac
ctagcacttctgcaggtggcaacctttaaaggctggatggacatcatgtatgcagctgtt
gatgcccgagatgtaaacttgcagcccaagtgggaggacaatgtgtacatgtacttgtac
ttcgtcatcttcatcatttttggcggcttcttcacactcaatcttttcgttggggtcata
attgacaacttcaatcaacagaaaaaaaagctagggggccaggacatcttcatgacagag
gagcaaaagaagtactacaatgccatgaagaagctgggctccaagaagccccagaagcct
atcccacgacccctgaacaagtaccagggctttgtctttgacattgtgaccagacaagct
ttcgacattgtcatcatggtcctcatctgcctcaacatgatcaccatgatggtggagact
gatgagcagagtgaagaaaagacaaaaatccttaacaaaatcaatcagttctttgtggct
gtcttcacgggagagtgtgtcatgaagatgtttgccttgcggcattactacttcaccaac
ggctggaatgtgtttgacttcattgtcgtggtcctctccattgggagcctgatattttct
gtgattcttacgtcacttgaaaattacttctccccaacactcttccgagtcatccgcctg
gcccgaattggtcgtatcctcaggctgatacgagcagccaagggaatccgcacactgctc
tttgccctcatgatgtccctgcctgccctcttcaacatagggctgctgctcttccttgtc
atgttcatctactccatcttcggcatggccagcttcccccatgtaagttgggaggctggc
atcgacgacatgttcaacttccagaccttcgccaacagcatgctgtgcctcttccagatc
accacatcggctggctgggatggcctcctcagtcctatcctcaacacaggacccccttac
tgtgaccccaatctgcccaacagcaatggctcccgggggaactgtgggaacccagctgtg
ggcatcctcttcttcacaacatacattatcatctccttcctcatcgtggtcaacatgtac
attgcagtgattctggagaacttcaatgtagccacgcaggagagcagtgaacctttgagt
gaggatgactttgacatgttctatgagacctgggagaagtttgacccagaagccactcag
tttattaccttttctgccctctcagactttgcagacaccctttcaggccccctgcgaatc
ccaaaacccaatcggaatatattaatccagatggaccttcccttggtccctggagataag
attcactgtttggacattctttttgccttcactaagaatgttctgggagaatctggggag
ttggattctctgaaggcaaatattgaagagaagtttatggcaaccaatgtttcaaaaaca
tcctatgaaccaatagcaaccaccctccggtggaagcaggaagacatttcagctactgtc
attcaaaaggcctatcggagctatgtgttacaccgttccgtgacaatctccaacccccca
ggtgtgctcagggctgaggaggaggctgtgtcacccccaggtgaagcctttgctgtattc
atggcaaatgaaaattgcacactcccagacaaatctgaaactgcatctaccacatctttc
ccaccatcctatgacagtgtcactagaggccttagtgatcaagtcaacatgagcacatct
agcttaatgcagaatgaagatgaagctaccaataagaaagcaattgcccctgggccatag
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