Zalophus californianus (California sea lion): 113928982
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Entry
113928982 CDS
T07874
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113928982 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zca03041
]
113928982 (DDX46)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113928982 (DDX46)
Spliceosome [BR:
zca03041
]
Complex A
U2 snRNP components
U2 related factors
113928982 (DDX46)
Complex B
113928982 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
113928982
NCBI-ProteinID:
XP_027461214
EnsemblRapid:
ENSZCAG00025002284
UniProt:
A0A6J2DXZ0
LinkDB
All DBs
Position
5:28114470..28190049
Genome browser
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccactatcggaagcgatcagcatcaagggggcgctctggaagt
cgttctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagcagagatagagacagaagaagagagaggtctcgtagcagggataaaagaagatct
cggtcaagagaccggaagcgcctgaggcgttccagaagtagagagagagacagaagtcga
gaacgaagaagatctcgaagtcgagacaggagacgctcaaggagtagaagccgaggccgg
cgatccagatcctctagtcctggcaataaaagcaagaaagctgagaataggtctaggtcc
aaagaaaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaag
gaggatgaaaaagaaaaagatgctggcaactttgatcagaataagctggaagaagaaatg
agaaagcgaaaagaaagagtagaaaaatggcgagaagagcagcgtaaaaaggccatggaa
aacataggggaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagttta
gaagatgatgatgatgatgaagatgatcctgcagaggctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtaaaagaggaagtaaag
aagtttaatatgagaagtgtgaaaggtggtgggggaaatgaaaagaagtctgggccaacg
gtaacaaaagttgtcactgttgtgacaaccaaaaaagcagtggtagattctgataagaag
aaaggtgagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaagag
gttgatcttcagacagctcttacaggctatcaaacaaaacagagaaagcttctagaacca
gtggaccatggaaaaattgaatatgaaccattcagaaaaaacttttatgttgaagttcca
gaattagcaaaaatgtcgcaagaagaggtaaatgtatttcggttggaaatggagggcatt
actgtcaagggaaaaggttgccccaaaccaattaaatcttgggtccagtgtggaatttcc
atgaagatcttaaattctctcaaaaagcatggctatgaaaagcccacgccaatccaaacc
caggcgattcctgctataatgtctggacgagatttgattggtattgccaagacaggaagc
ggaaagaccattgcttttctgttacccatgtttagacacatcatggatcagaggtcatta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacag
attactaaagaatgtaagaagttttcaaagaccctgggacttagagtggtgtgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacatatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgtccgacctgatcgacagacagttatgttttca
gctacctttcccagagctatggaggctttggctcgcagaatcctgagtaaacccattgaa
gtgcaggttggaggcaggagtgtggtttgctcagatgtggaacaacaagtgattgtgatt
gaagaagaaaagaagtttttgaagttacttgagcttcttggccattatcaagaatcggga
tctgtcattatatttgtggataagcaggaacatgcagatggtcttctgaaagatttaatg
agagcatcttatccttgcatgtctcttcatggaggtattgatcagtatgacagagatagc
atcataaatgactttaagaatgggacctgcaaacttctcgtagctacttctgttgctgcc
cgaggtctagatgtaaaacatctgattcttgtggtaaattacagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaataaaggttatgcgtat
acttttatcacagaagatcaagctcgctatgccggtgacataattaaagctcttgaattg
tcaggaactgcagtgcctcctgatctggagaaactttggagtgatttcaaagatcagcag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggcaaatgagaggaagaagttgcaaaaagcggctctcggt
ctgcaagattcggatgatgaggatgctgcagttgacattgatgaacaaattgaaagtatg
tttaattcaaagaagagagttaaagatatggctgctcctggaacatctagtgttcccgct
ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gctcagaagaatctgggaattgagtctcaggtagatgtgatgcaacaggccaccaatgca
attctcagaggtggcaccattctggctcccactgtgtctgccaaaaccattgcagagcaa
cttgctgaaaagatcaatgccaagctcaattatgtgcctttggagaaacaagaggaagag
agacaggatggtggacagaatgaatcttttaagagatatgaggaagaattagagatcaat
gacttcccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagt
gaatattccgaagctgcaattacaatcagaggaacatatttcccacctggcaaagaacct
aaggaaggagagcggaaaatttacttggcaattgaaagtgccaacgaactggctgtgcag
aaagcaaaagcagaaatcaccaggcttataaaagaagaactgattcggctgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcctataa
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