Zalophus californianus (California sea lion): 113929126
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Entry
113929126 CDS
T07874
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03022
Basal transcription factors
zca03420
Nucleotide excision repair
zca05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113929126
09124 Replication and repair
03420 Nucleotide excision repair
113929126
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
113929126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zca03021
]
113929126
03400 DNA repair and recombination proteins [BR:
zca03400
]
113929126
Transcription machinery [BR:
zca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113929126
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113929126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
Motif
Other DBs
NCBI-GeneID:
113929126
NCBI-ProteinID:
XP_027461599
EnsemblRapid:
ENSZCAG00025011549
UniProt:
A0A6J2DZ09
LinkDB
All DBs
Position
5:52954917..52998656
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFRELPLEEHNGEKFCYGCQGELKDQHVYVC
AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTSSSI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcgatgggaaggaggctatgaaaggacatgggag
attcttaaagaagatgaatcaggatcacttaaagctacgatagaagacattctcttcaaa
gcaaagagaaaaagagtatttgagcaccatggacaagttcgacttggaatgatgcgtcat
ctttatgtggtagtagatggatcaagaacaatggaagaccaagatttaaagccaaataga
ctgacttgtactttaaagttattggaatacttcgtagaagaatattttgatcaaaatcct
attagtcagattggaataattgtaacaaagagtaaaagagctgaaaaactgaccgaactc
tcaggaaacccaaggaaacatataacatctttgaagaaagctgtagatatgacctgtcat
ggagaaccatccctctataactccttaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagttctaatcatctttagcagcctcacaacttgtgatccgtct
aatatctatgatctaatcaagaccctaaaggcagctaaaattagagtgtctgttatcgga
ttatctgcagaggttcgggtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattataaagaattgctgacacatcatgtcagtcctccgcct
gctagctcaagttctgaatgttcacttattcgcatgggatttccccagcataccattgct
tctctgtctgatcaagatgcaaaaccctctttcagcatggcgcacttggatagcaacact
gagccaggacttacattaggagggtacttctgcccacagtgtcgggcaaagtactgtgag
cttccagttgaatgtaaaatctgtggtcttactttggtgtctgctccgcatttggcacgg
tcttaccatcatttatttcctttggatgcttttcgagaacttcctctagaagaacataat
ggagaaaaattttgttatggatgtcagggggaattgaaagaccaacatgtctatgtttgt
gctgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcacgactctcttcac
tgttgtcctgggtgcattcataagattccaacttcttcgagtatttga
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