Zalophus californianus (California sea lion): 113933442
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Entry
113933442 CDS
T07874
Symbol
POM121C
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03013
Nucleocytoplasmic transport
zca05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113933442 (POM121C)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
113933442 (POM121C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113933442 (POM121C)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113933442 (POM121C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
113933442
NCBI-ProteinID:
XP_027469355
EnsemblRapid:
ENSZCAG00025017702
UniProt:
A0A6J2EK50
LinkDB
All DBs
Position
10:complement(104485254..104540857)
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AA seq
1210 aa
AA seq
DB search
MSPAAAAAGGGERRRPIASVRDGRGRGGGCGGPAGAALLGLSLFGLVLYLVPAAAALAWL
AVGATAAWWGLSREPRGSRALASLVRNARRQRTLHASPPAKSAVNGNLLEPRTLLEGPDP
AELLLMGSYLGKPGPPQPAPAPEVRDLLERPGRRRTPARAAPPAHSPHRVHIYPSLPTPL
LRSSRRPSLRDCGSLSNRFVITPRRRYPIQQAQYSLLGVLPTVCWNGYHKKTVLSPRNSK
MVCSPVTVRIAPPDSKWTRSPIPEQTINSTLSSPSSNVPDPCAKETVLSALKERKKRTVE
EEDQIFSDSQENKRRRHDSSGSGHSAFEPLVANGVPASFVPKPGSLKRGLNSQSSDDHSN
KRSRTSSVSSLTSTHTGGIPSSSRNAITSSYSSTRGFSQLWKRSGPSSSPFSSPASSRSQ
TPERPAKKIREDELSHRSSSSTPLATDKEAPGEKVADTSTWKAQTSCSSPPTPGSSGQRR
RRVQLLPSRRGARLTLPPPPQLGYSITAEDLDLEKRASLQWFNKALADGTDTASSSVAEK
PPATQPSLTFTLPTAGTAASPATLPAPSSSSLLESLKKMQSCAGLSSTPESTGVATTVAP
LPPKTPSLLAPLGSSQSGPLPGTSSDSKSAATFLALTPTTSPTPATDTTRSPPAPQAETS
AKSPALAAPSPTPKQSLLLGMLSTPPADPPASTAPAVSSASPMFKPIFAAPPKSESGGPL
PSSLSKVPTTTPSSSALPAPASHPQPTFKPIFGSVGLPPPAHLSAPFSFGQTAALATATS
AGLFTGQASAASAVAPVAPVSTASTSADSASKPAFSFGVSSVTSTTTSAAAPFLFGAPPA
SGASFSPAMGSVFQFGKPPAAPASTAATTFGQPVPGAAQTAASSGGTSGFGGFGGGLTTP
APATSSPLALTFTTTAAAVPAFHIPFGSSPKPAPPSYPGANPQPAFGAADGQQQGPAKPA
LAPSFGSSFAFANSAAPAQAATPAPGPAQPAFGSAAQSAFGGLKPAASTFGTPASTQPAF
GSGTPVFSFGAATTSGFGATTQTTSSGTGSSVFGGTTLSPFTFGGSAGPAGGGGFGINVA
APGTSGAFSFGTGQSGSTGGTTPFGGGLSQSTLGAPSQSTPFAFNVAGTPESKPVFGGTS
TPTFGQNTPAPGVGASGSGLSFGASSTPTQGFVGVGPFGSAAPSFSIGAGSKTPGARQRL
QARRQHTRKK
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggctgcggcggctggcggaggcgagcggcggcggccgatagcgagcgtc
agggacggccggggccggggcgggggctgcggcggcccggccggggcggcgctcctcggt
ctgtcgctgttcggcctcgtgctgtacctggtgccggcggcggcggcgctggcctggctg
gccgtgggggccaccgcggcctggtggggactgagccgcgagccccgcggttcgcgcgcc
ctcgcctcgctcgttcggaacgcgcggcgtcagcgaaccctacacgcctcgcctccagcc
aagtcggcggtgaacggaaatctcctagagccgcggaccctgctcgaaggaccggacccc
gccgaactgctcctcatgggcagttacctgggcaagcccggccccccgcagcctgccccc
gccccggaggtcagggacctgctggagaggcctggccgccgccgcactcccgctcgcgcc
gcgccgcccgcgcactcgccccatcgtgtgcacatttacccctctcttcccactcctctt
ctccgatcctctaggaggccatccctccgggattgtgggagtttatcaaaccggtttgtg
ataacacctcgaagacgatatccaatccagcaggcccagtattctcttctgggcgtactt
cctacagtatgctggaatggttatcacaagaagactgtgctgtctcctcggaattccaaa
atggtgtgcagcccagtgacagtgaggattgctcctccggatagtaaatggactcgttcg
ccaataccagagcagacaatcaactcaacactgtcctcaccatcaagtaatgtcccagac
ccatgtgcaaaagagactgtactgagtgccctcaaggagaggaagaaaaggacagtggag
gaggaagaccaaatattttctgatagccaggaaaataaaagaaggcgccatgatagcagt
gggagtggacattcagcatttgagcccctggtggccaatggagtccctgcttcttttgtg
cctaagcctggctctctgaagagaggtctcaattcccaaagctccgacgaccactcgaat
aagaggtctcgcacctcttccgtgagctccttgacaagcacgcacacgggtggcatccct
agctccagccgcaatgccattaccagttcttacagttccactcgaggtttctctcagctt
tggaagaggagtggccccagctcgtcgccgttctccagccccgcctcatcccgttcccag
acccccgagaggccagcaaagaaaataagagaagacgagctttctcatcgttccagttct
tcaaccccattggcaacagacaaggaggccccgggagaaaaggttgcagatacaagcaca
tggaaggcgcagacctcgtgcagctccccgcccacacctggcagctccgggcaacgcagg
cgaagggtgcagttgctgccctcccggcgaggggcccggctgacgctgccaccccctccc
cagcttggctactccatcactgccgaagacctcgatctggaaaagagagcttcgctgcag
tggtttaacaaggccctggcagacgggaccgatactgcctcgagctctgtcgccgagaag
ccccctgccactcagccttctctgacgtttaccctgcccactgctgggaccgctgcctct
ccagccaccctcccagcccccagcagcagctcactgctggagagcttgaagaagatgcag
agttgtgcaggcctatcgtctaccccggaatccactggagtggcaaccactgtggcccct
ttgcctccgaagacacccagccttctggcccctcttggctcctcacagtcagggcccctt
ccaggcacctcctcggactccaaatccgcagccactttcttggcgctgacccctaccacg
tccccgacaccagccactgacaccaccaggtcacctccggctcctcaggctgagacatct
gccaaatccccagccctggctgccccgtcccccacccccaagcagagtcttctgctggga
atgctgagcaccccacctgctgacccccctgcgtctacagcccctgctgtgtcttcagca
tcccccatgttcaagcccatctttgcggccccgccaaaaagcgagagcgggggccccttg
ccgtccagcctctccaaggtccctaccacgacaccttccagctctgccctccctgcacct
gctagccaccctcagcccacgttcaagccgatctttggcagcgtggggctccctccacct
gcgcacttgtccgcccccttctccttcggtcagaccgctgctctagccactgccacgagc
gccggtctcttcaccggccaggccagtgccgcctcagccgtggctcctgtggctcccgtg
agcacggccagcacgtcggcagactcggcttcgaagcccgcgttcagctttggcgtgagc
agcgtgaccagcaccaccacctccgctgccgcgcctttcctgtttggggcgcccccggcc
tccggcgccagctttagcccggccatgggctccgtcttccagttcggcaagccccctgcc
gcgcccgcgtcgacggccgccaccacgtttggccagcccgtccccggggccgcgcagaca
gccgccagcagcggcggcacctccggcttcggcggcttcggcggcggcctcaccacgccc
gcgcccgccaccagcagcccgctggccctgaccttcaccaccaccgccgccgccgtcccg
gccttccacattcccttcggctcgagccccaagcccgcgccgccgtcgtacccgggtgcc
aacccccagcccgcgttcggggccgccgatgggcagcagcaggggcccgccaagcccgcc
ctcgcccccagcttcggcagctctttcgctttcgcgaactccgcggccccggctcaggcc
gccaccccggcgcccggcccggcccagcctgccttcggcagcgccgcacaatccgctttc
ggcggcttgaagcctgccgcctccaccttcggcacccccgccagcacccagcctgccttc
ggcagcggcacgcctgtgttctccttcggggcggccaccacctcgggtttcggagctacg
acccaaaccaccagcagcgggaccggcagctccgtgttcggcggcacgacgctgtcgccc
ttcacgtttgggggatccgccggcccggccggcggcgggggctttgggatcaacgtggcc
gcccccggcacctccggagcgttcagctttggcacgggacagagtgggagcaccggaggc
acaacccctttcggaggaggcttgagtcagagcacgttgggcgctcccagtcagagcaca
ccctttgccttcaacgtggccggcacgcccgagagcaaacctgtgtttggaggcacctcc
acacccacctttggtcagaacacccctgcccccggggtgggcgcgtcgggcagtggtctc
tcctttggggcatcctcaacacccacccaaggctttgttggagtcggacctttcggctcg
gcggccccttccttttccattggtgcaggatccaagaccccgggggctcggcagcgactg
caggcccgcaggcagcacacccgcaagaaatag
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