Zobellella denitrificans: AN401_13015
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Entry
AN401_13015 CDS
T05100
Name
(GenBank) carboxylate--amine ligase
KO
K19789
DNA repair protein RadD
Organism
zdf
Zobellella denitrificans
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zdf03400
]
AN401_13015
DNA repair and recombination proteins [BR:
zdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AN401_13015
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
SLFN-g3_helicase
AAA_16
UPF0547
DZR
AAA
AAA_30
zf-ribbon_3
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
ATG74664
UniProt:
A0A291HRA6
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Position
2797776..2799521
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AA seq
581 aa
AA seq
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MFTLRPYQQDAVDRTLDYFRRHDAPGLLVLPTGAGKSLVIAELARLARGRVLVLAHVKEL
VEQNHAKYSAYGREAAIFSAGLGQKQAHTQVVFGSVQSVARNLDAFSGFSLVVIDECHRV
SDDDDSQYLQVVNHLRRDNPRLKVLGLTATPYRLGLGWIYQSHHHGMVRSRAPRFFTHCL
FELPLRLMIKQGYLCPPQLVDAPVVHYDFSRLYEQGLFSEQALDRELARQPRVTPHIVAQ
IQDYAEPRQGVMIFAATVRHAAEVAGLLPPGQTALITGETPGPERDAIIRRFKARELKFL
VNVAVLTTGFDAPHVDLIAILRPTQSVALYQQIVGRGLRLSPGKHDCLVLDYAGNNMDLF
APEVGEPRPHPDSTQVQVPCPACGFANIFWGKTDAEGRVLEHFGRRCQGLFEDDEGQREE
CGYRFRFKSCPQCLAENDIAARQCHDCGQLLVDPDKQLKEALALKDALVLRCAGMTLAAE
QGRFGPALKVTYHDEDGTELVQWYGFDAKGPKGRFFRDFVAPHWPAPGLEPDFAGLAEVE
AAAARFRHPDFVIARKHKRGWQVKEKIFDYQGRYRRAHELG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtttacccttcgcccctatcagcaggacgcggtcgaccgcaccctggactactttcgc
cgccatgatgcgccgggacttttggtgttgcccaccggcgccggcaagagcctggtgatc
gccgagctggcccgcctggcccggggccgggtgctggtgctggcccatgtcaaggagctg
gtggagcagaaccacgccaagtacagcgcctacggccgggaggcggccatcttctccgcc
ggcctgggccaaaagcaggcccatacccaggtggtgttcggctcggtgcagtcggtggca
cgcaacctggacgccttttccggcttcagcctggtggtgatcgatgagtgccaccgggtg
tcggacgacgatgacagccagtacctgcaggtggtcaaccacctgcgtcgggacaatccc
aggctcaaggtgctggggctcaccgccactccctaccgtctggggctgggctggatctac
cagagccaccaccacggcatggtgcgcagtcgtgcgccgcgctttttcacacactgcctg
ttcgagctgccgctgcggctgatgatcaagcagggttacctgtgcccgccgcaactggtg
gacgcccccgtggtgcactacgacttttcccgtctttatgagcaggggctgttcagcgag
caggcgctggatcgggaactggcccgccagccccgggtcaccccccacatagtggcgcaa
attcaggactacgccgagccccggcaaggggtgatgatcttcgccgccaccgtgcgccac
gccgccgaagtggccggcctgttgccgcccgggcagaccgcgctgatcaccggcgagacc
cccggcccggagcgggacgccatcatccgccgcttcaaggcccgggagctgaagttcctg
gtcaatgtggcggtgctcaccaccggcttcgacgccccccatgtggatcttatcgccatt
ctgcgccccacccagtcggtggccctgtaccagcagatagtgggccggggcctgcgcctt
tcgccgggcaagcacgactgcctggtgctggattacgcgggcaacaacatggacctcttc
gcccccgaagtgggcgagcccaggccccatccggacagcacccaggtgcaggtgccctgc
cccgcctgcggtttcgccaatatcttctggggcaagaccgacgccgagggccgggtgctg
gagcacttcggccgccgctgccagggcctgttcgaagacgacgagggccaacgggaggaa
tgcggctaccgtttccgcttcaagtcctgcccccagtgcctggcggaaaacgacatcgcc
gcccgccagtgccacgactgcggccagctgctggtggatccggacaagcaactgaaggaa
gccctggcgctgaaggacgccctggtgctgcgctgcgccggcatgacgctggcggcggag
cagggcaggttcggcccggcgctcaaggtgacctatcacgacgaggacggcaccgagctg
gtgcaatggtatggcttcgacgccaaggggcccaagggccgctttttccgggacttcgtg
gctccccactggcccgccccgggcctggagccggatttcgccggcctggccgaggtggag
gccgccgccgcgcgctttcgccacccggacttcgtcatcgcccgcaagcacaaacggggc
tggcaggtgaaggagaagatcttcgactaccagggccgctaccggcgcgcccatgaattg
ggataa
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