Ziziphus jujuba (Chinese jujube): 107421985
Help
Entry
107421985 CDS
T04794
Name
(RefSeq) sphingoid long-chain bases kinase 1
Organism
zju
Ziziphus jujuba (Chinese jujube)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
107421985
NCBI-ProteinID:
XP_048333119
LinkDB
All DBs
Position
3:complement(join(5084122..5084274,5084573..5085510,5086328..5086427,5088264..5088410,5089602..5089639,5089775..5089868,5090399..5090770,5090899..5091405))
Genome browser
AA seq
782 aa
AA seq
DB search
MQKSGSVSRNSNTPLKVSVPQQSLRRLGLCSQIATATGGQHASPVVFPEKQKRSKVKSSR
RGNDATPITPTSDDPGKLKSFEHRIDIGDGLLGAVGGDEKSDLLGYGVYSGKLVLDKKKT
VSNDSASNDSQQQTSSSNDNWNQEAVDAKLTSKALIWGSHMLSLEDVISVTYNVGLRHFT
VHSFPWKKGSCGFSCFMKPKRARKDYRFLASSTEEAVHWVGGFADQQCYVNCLPHPLVSS
KKQASSELLPIDTPPELIFKCKSPPRMLVILNPRSGHGRSSKVFHGVVEPILKLAGFKLE
VVKTTSAGHAKKLASSVDISTCPDGIICVGGDGIINEVLNGLLSRDNQKEGISIPIGIIP
AGSDNSLVWTVLGVRDPVSAAMAIVKGGLTATDVFAVEWIQTGVLHFGMTVSYYGFVSDV
LELSDKYQKRFGPLRYFVAGFLKFLCLPKYSYEVEYLPASKEDQEGKLSVEREVVDMSDL
YTDIMKRSNADGIPRASSLSSIDSIMTPSRMSGDLDTTCSNTHASAEPSDYVRGLDPKSK
RLSSGRSSITAEPEVIHPQLPLSTTPNWPRTRSKSRTDKGWSGLTATHDNSRCSWGNNMN
DKEDISSTLSDPGPIWDAEPKWDSEPTWDVENPIELPGPSDDAETGTKKEVPVPRYEDKW
LVKKGQFLGIIVCNHACRTVQSSQVVAPKAEHDDSSLDLLLVHGSGRLRLMRFFVLLQMG
RHLSLPYVEYVKVKSVKIKATGKHTHNGCGIDGELFRLNGQVISSLLPEQCRLIGRSAIH
DV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagtgggagtgtttccaggaatagtaacactcctctcaaagtgagcgtgcct
cagcagtctcttcggcgcctgggattgtgttctcagattgccacggcaactgggggccag
catgcttccccagttgtctttcctgagaaacagaagcgcagtaaagtcaagtcttcgagg
cggggaaatgatgccactccaataacccctacctctgatgaccctggcaaactgaagagc
tttgagcataggattgacattggggatggattactgggtgctgttggtggagacgaaaag
tctgatttgttgggttatggggtctactcaggaaagttagttttggataagaaaaaaacg
gttagtaatgattcggcttcaaatgattcgcaacaacaaacctcatcctctaatgataat
tggaaccaagaagctgtcgatgctaagcttaccagcaaggctttgatatggggttcgcat
atgctgagtcttgaggatgttatctcggttacatacaatgttggtctcagacattttaca
gtacattctttcccttggaagaaggggtcttgtggcttttcttgctttatgaaacctaaa
agagctcgcaaggactatcgtttcttagcttctagcactgaagaggcagttcattgggtt
ggtgggtttgcagatcaacagtgttatgtgaattgtttgccccacccattggtttcttca
aagaagcaggcatcttcagagttacttcccattgatactcctcccgaattaatttttaaa
tgtaagagcccaccaagaatgctcgtcatattgaatccacgttctggacatggccgttcg
agtaaggttttccatggtgttgttgaacctattcttaagcttgcaggtttcaaattggag
gtagtcaaaacaacatctgcaggccatgctaaaaagcttgcatcaagtgttgacatcagc
acttgtcctgatggaattatatgtgttgggggtgatggcattattaacgaggttctgaat
ggtttacttagtagagacaatcaaaaagaaggaatttccataccaattggaattattcct
gctggttctgataactctttagtttggactgttcttggagttagagatccggtttctgct
gcaatggctattgtgaaggggggtcttaccgctactgatgtttttgctgttgagtggatt
cagactggtgttcttcactttgggatgacagtctcatattatggttttgttagtgacgtg
ttggagctttccgataaatatcaaaagcgttttggtcctctgcgttattttgttgctggt
tttctcaaatttctgtgcttgcctaagtacagctacgaagtggagtaccttccagcatca
aaagaggatcaagaaggaaaactatctgttgagcgggaagtagttgacatgtcggaccta
tacacagacattatgaagagatcaaatgcagatggcattcctagagcctctagtctttct
agtatcgactccataatgactcccagtcgaatgtctggagatttggatacaacctgtagt
aacactcatgcaagtgctgaaccatcagactatgtgcgtggcctggatccaaaatctaaa
cgattatcatctggaagaagcagtataactgctgaaccagaagttattcatccgcagtta
cctctctcaacaactccaaactggcctagaaccagatcaaagtcgaggactgataaagga
tggtctggattgacagccactcatgacaactctagatgttcttggggcaacaatatgaat
gataaagaggacatatcgtcaacactgtctgatccaggtccaatttgggatgcggaacca
aaatgggactctgaacctacttgggatgtggaaaatcctattgaattgccagggccatca
gatgatgcagagacgggaactaaaaaagaagtccctgtgcctaggtatgaagataagtgg
cttgtaaaaaagggacagttccttggtatcatagtttgcaaccatgcatgcagaactgtt
caaagttctcaagtcgtggcgccaaaagctgagcacgatgatagctctttggatttgctc
ttagttcatgggagtggacgactaagactgatgagattttttgtgctgctgcagatgggt
agacacctttcacttccatacgttgagtatgtcaaggtgaaatcagtgaagattaaagca
acaggaaagcatacccataatggttgtggcattgatggtgagctttttcgactcaatggg
caagtcatatcttcattgcttccagaacaatgcagacttattggtcgttccgccatccat
gatgtatga
DBGET
integrated database retrieval system
