Ziziphus jujuba (Chinese jujube): 125422917
Help
Entry
125422917 CDS
T04794
Name
(RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g04860
Organism
zju
Ziziphus jujuba (Chinese jujube)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR
PPR_2
PPR_1
Alpha-amyl_C2
PPR_3
E_motif
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
125422917
NCBI-ProteinID:
XP_048331482
LinkDB
All DBs
Position
5:complement(join(2783270..2785269,2786440..2786454,2788046..2788059,2791067..2791320,2791442..2792247,2792488..2792617,2792694..2792831))
Genome browser
AA seq
1118 aa
AA seq
DB search
MYAYKRSTYLSNERPINDMEFLPLLYSFCLCIFVFPSFTSPAILFQGFNWESSNKGGWYN
SLKNSVPDLANAGITHVWLPPPSQSVAPQGYMPGRLYDLNASKYGSRDELKSLIAALKEK
GIKALADIVINHRTAEKKDGRGIWCIFEGGTPDGKLDWGPSFICKDDTAYSDGNGNPDSG
EDFQPAPDIDHLNPQVQKELSEWMNWLKTEIGFDGWRFDFVKGYAPSITKIYMEQTSPGF
AVGENWNSLSYGQNGKPDTNQDAHRGTLANWVEAAGGAVTAFDFTTKGILQAAVEGELWR
LKDSNGKPPGLIGIKPARAVTFIDNHDTGSTQKLWPFPSDKVILGYAYILTHPGIPSIFY
DHFFDWGLKEELTKLTAIRTRNTIQTTSTVNILAADADLYLAGIDNKIIVKIGPKMDLGN
LVPPNYKVATSGKDYAVWEKNXFHHFLEERGVALTSSSSSLPLNSDKSRIEANQIHTFLI
KSGVRHFVYVSTAFLDFHTKLGCLQVAHRLFDDMLERDVVSWNALICGFSRNGYDVDALK
LFVQMCREGFNPQETTLVSLVPSCGRHELIFQGKSVHGFAIKAGLYLYSEVKNVLTSMYG
KYADLDAAKCLFEEIDDKGVISWNTMIGAYGQNGFFDEAMLVFKQMMVESVKANPVTLVS
LLSANANPETTHCHAIKLGIIDDISVIASLVCEYSRCGNSVSAELLYKSLPQKNLVPLTA
ILSCHAEKGNMDTVMRIFAEMQQLDMKMDAVAMVSILRGIRDPAHFGIALAFHGYGFKSG
LSIDNLVTNGLISMYSRFDAIEAAFSLFSEMHERPIISWNSLISGCVQAGKSSDAFELFC
QMKIYGHSPDAITIASLLSGCGQLGYLQFGERLHNFVLRHDFGVEDFVGTALIDMYTKCG
RIEHAERVFKCIKDPCLATWNSMISGYSLYGLEHKALACFSDVQEKGLKPDKISFLGVLA
ACTHGGLVDEGRKYFQIMREEFNMVPGLQHFACMVGLFGRAGLFEEALTLIRSMDVEPDF
AVWGALLNACCIHQEVELGEYLAKKLFLLDSKSGGFYILMSNLYASKGRWDDVAKVRDMM
RDSGGDGCSGISVIEVTSMEGMNKDLSSNGSLEFGYKY
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcctataaaagaagcacctatctctccaatgaaagaccaatcaacgacatggaa
tttctccctctactctattcgttctgcctctgcatatttgtctttccttccttcacttct
ccagctatattattccaggggttcaattgggaatccagtaacaaaggaggatggtataat
tccctaaagaattctgttcctgatcttgctaacgcaggcataactcatgtctggctacct
cctccgtctcaatctgttgctcctcaaggttacatgccgggaaggctatacgatctcaac
gcatcaaaatatggttcccgggatgaactcaagtctctaattgctgctttgaaagagaaa
ggaatcaaagcccttgctgacattgtaataaaccacagaacggctgagaagaaggacggg
agaggaatatggtgcatctttgaaggtggaaccccagatggaaagcttgactggggaccc
tctttcatctgcaaagatgacactgcctattccgacggcaatggaaacccagatagcggt
gaggattttcaaccggcccctgacattgaccacctcaatccacaggtacagaaagagctt
tctgagtggatgaattggctgaaaaccgaaatcggattcgacggatggcgattcgacttc
gtgaagggttatgctccaagtattaccaaaatttacatggaacaaacatctccgggtttc
gcagtaggggagaattggaactctctttcttatggacaaaatggaaaacctgatactaac
caggacgctcaccgtggtacacttgctaattgggttgaggctgctggtggggctgttact
gcttttgacttcactacgaaagggattctacaagctgctgttgaaggagagctgtggagg
ttgaaggactccaatggaaagcctccagggttgattggaataaagcctgcaagggcagtc
acattcattgacaatcatgatacagggtctactcaaaagctttggcctttcccatctgat
aaagtcattctgggatatgcatacattctcactcatcctggcattccatcaatattctat
gatcatttctttgactgggggctcaaagaggagttaacaaaactgactgcaattaggaca
agaaacaccatccagaccacgagcaccgtgaacattttagctgctgatgctgatctttat
ttggctgggattgataacaagatcattgtgaagattggtccaaaaatggatttgggaaac
cttgttccgccaaactataaagttgctacctctggaaaagactatgctgtttgggagaaa
aattgattccaccattttttagaagaaagaggagttgctcttacttcttcttcttcttcc
ttacctcttaactcggacaaatcaagaattgaagcaaatcagattcataccttcttgata
aaatctggtgttcgccattttgtctatgtgagcactgcgtttcttgactttcatacgaaa
ctcggatgcttacaagttgcacaccgcttattcgatgatatgctcgagagagatgttgtc
tcttggaacgcattaatttgtggattttcacgaaatggatatgatgttgacgctttaaaa
ttatttgttcaaatgtgtagagagggttttaatcctcaagaaacaactttggttagtttg
gttccttcgtgtggtagacatgaattaattttccaaggaaaatctgtccatgggtttgca
attaaagctggcctttatttgtattctgaggtgaagaatgtgcttacgtctatgtatggc
aaatatgcggatttggatgccgcaaaatgcttgtttgaagagatagatgataagggcgtg
atttcttggaataccatgattggtgcttatggacaaaatggtttctttgatgaggcgatg
cttgtcttcaagcagatgatggtggaaagtgtgaaagcaaatccagtgaccctggttagc
cttctctcagcaaatgctaatccagaaaccacccattgtcatgccattaaacttggtatc
atcgatgatatttccgtgattgcttcactagtttgtgaatattcaaggtgtggaaattca
gtatcagcagaactgctttacaagtcactaccccagaaaaatttagttcccttaacggca
attttatcatgccatgctgagaagggtaacatggacactgtgatgagaatttttgcagaa
atgcagcagttagacatgaaaatggatgcagtcgctatggttagcatccttcgtgggatt
agagaccctgctcacttcggcattgcacttgctttccatggttatgggttcaagagtggg
ttgagcattgataatttggtgacaaatgggttgataagcatgtattcaaggtttgatgct
atagaagctgctttttctctgttttctgagatgcatgagagaccaataatcagttggaat
tctttgatttctggctgcgtgcaggctggaaagtcaagtgatgcctttgagttattctgt
caaatgaagatatatgggcatagtccagatgccattacgattgctagtttactatctggg
tgtggccaacttggatatttgcagtttggggagagactccataactttgtcttgagacat
gattttggggtggaagattttgttgggactgctcttatagacatgtacaccaaatgcgga
agaatagagcatgctgaaagggtgtttaagtgcatcaaagatccatgtttggcaacatgg
aactcaatgatttcgggttatagtttgtatggattagagcataaagctcttgcttgcttc
tctgacgtgcaggaaaaagggctaaaacctgataaaatcagtttcttgggagttttagca
gcttgtacccatggaggtcttgttgatgaaggaagaaaatacttccaaatcatgagggaa
gaattcaatatggtgccaggtttgcagcactttgcttgcatggttggtctctttggtcgt
gctggcttgtttgaggaggcattaacattgataagaagcatggatgtagagcccgatttt
gctgtatggggagctttgctgaatgcctgttgcatccaccaagaggtggagctgggtgag
tacttggctaaaaagttatttttgttggacagcaaaagtggtgggttttatattttgatg
tcaaatctttatgcgagtaagggaaggtgggatgatgtagcaaaagtgagggatatgatg
agagacagtggaggggatggctgttcagggattagtgttattgaggtcacttcgatggaa
ggcatgaataaagatttatccagtaatggcagtttggaatttggatacaaatactag
DBGET
integrated database retrieval system
