Zea mays (maize): 100192868
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Entry
100192868 CDS
T01088
Name
(RefSeq) LHY protein
KO
K12133
MYB-related transcription factor LHY
Organism
zma
Zea mays (maize)
Pathway
zma04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100192868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zma03000
]
100192868
Transcription factors [BR:
zma03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
100192868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
100192868
NCBI-ProteinID:
NP_001131529
UniProt:
B6SPA3
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Position
10:complement(79577671..79637938)
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AA seq
718 aa
AA seq
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MEVNSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQ
IRSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKANSPYPRKSGLSSETPTKELP
SDKSTKPNMPLSNENVLMAGDASLQKFQRKKLSGKESCSEVLNLFRDAPSPSFSSVNKSS
SNHGAPIEASKTKIRDMTIMENSSLNPNMQEDVKEINDQEMERLNGTQISSKCEHSHEGY
LDISMQQMKLKPESVETTDVDKQTARASHSLAEITGTTSIPVTATEETHSVLTSDQVGIN
GSMNPSIHPMFPADPKFDSSATPQPFPHNYAAFAPMMQCNCNQDTHRSLVNMSSTFSSML
VSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENLADGVQGRSIGSPPSMASIVAATV
AAASAWWATQGLLPFFAPPMAFSFVPAPSAAFPTVDVPRPSEKDRDCPAENAQKECQEAR
KQGQLEGFRVTASSEYDGSGKGEVSVHTELKISPVQNADATSAAGADTTDAFMNKKKQDR
SSCGSNTPSSSDVDVDNVPEKEGNANEKAKQASCSNSSAGDTNHRRFRSSGSTSDSWKEV
SEEGRLVFHALFSREKLPQSFSPPQAEGSKEVGKKEEDEVTTVAVDLNKSTTSIDHDLDT
IGEPRASFPNELSPLKLKSRQTGFKPYKRCSVEAKENRVPASDEVGTKRIRLDSEAST
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaattcctctggtgaggaaacggtgataaaggtaaggaagccatacacaata
accaagcagcgggagcggtggacagaggctgagcacaaacggttccttgaagccttgaaa
ctttatggcagagcatggcagcgcatagaagagcatgttgggacaaagacggccgtgcag
atcagaagtcacgctcaaaagttcttcaccaagttggaaaaggaagctattaacaatggt
acttctccggggcaagcccatgacattgacataccgccaccacggcctaaaagaaaggct
aacagtccatatcctcgaaaaagtggtctcagctctgagacaccaaccaaagaacttcca
agtgacaagtcaacaaaaccaaatatgcccttgagcaatgagaatgtactaatggcaggt
gatgcatctcttcagaaatttcaaaggaagaagttgtctggaaaagaaagttgctcggaa
gttcttaatctcttccgtgatgccccatctccatcattttcttcagttaacaaaagctct
tcaaatcatggtgcaccgattgaggcaagtaaaacaaaaatccgagatatgaccattatg
gaaaatagttctcttaaccccaacatgcaagaggatgtaaaggaaatcaatgatcaggag
atggaaaggcttaatggtacccaaatcagctctaaatgtgaacactctcatgagggatat
ttggacatctcaatgcaacaaatgaagctaaagccagagtctgtggagacaacagatgtg
gacaaacaaaccgcaagagcttcacactccctagcggagataactgggacaactagcatt
ccggtcactgcaactgaagaaactcattctgttctaacaagtgatcaagtgggaatcaat
ggaagcatgaacccatccatccatccaatgtttcctgcagatccaaaatttgatagcagt
gccacaccacagccttttcctcataattatgctgcctttgctccaatgatgcagtgcaac
tgcaaccaagatacccacagatcattggtcaacatgtcatccaccttctccagcatgctt
gtttccacgttgttgtcaaaccctgccatccatgcagctgccaggctcgcagcatcatac
tggccagcagctgaaggtaacactccgattgatccgaatcaagaaaatcttgcagatggt
gttcaaggaaggagcatagggtctcctccaagcatggcttctattgtagcagctacagtt
gctgcagcatctgcatggtgggcaacacaaggtcttctccctttcttcgccccacccatg
gctttttcatttgtgccagctcccagtgccgccttccccacagttgatgttccacgacct
tcagagaaagatagagattgcccagctgaaaatgcacagaaggaatgccaagaagctcga
aaacagggacagcttgaaggtttcagagttaccgcttcttcagagtatgatgggagtgga
aaaggcgaggtgtctgtccacacagagttaaagatatctcctgtccagaatgctgatgcc
acgtctgccgcaggagctgacacgactgatgcattcatgaataagaaaaagcaggaccgc
tcttcatgcggttctaacacaccttcaagtagtgatgtagatgtggacaatgtccctgag
aaggagggcaatgctaatgagaaggcgaagcaagcctcctgcagcaactcttcagctggt
gacactaaccaccgcagatttagaagcagtggaagcacaagtgattcatggaaggaagtt
tccgaagagggtcgtctggttttccatgcgctgttcagtagagaaaagcttccgcaaagc
ttttctcccccacaagcagaaggctcgaaggaagttggcaagaaggaggaagatgaagtc
accacagtggcagttgacctcaacaagagtaccacaagcattgatcatgacctcgacaca
attggtgagccaagggcttcctttcccaatgaactgtcgcccctgaagctgaaatcgcgc
caaacaggcttcaaaccatacaagagatgttctgtggaagcgaaggagaatagggtgccg
gctagcgacgaggttggtaccaagaggattcgtcttgatagtgaagcatcaacatga
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