Zea mays (maize): 100304252
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Entry
100304252 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100304252
KO
K12878
THO complex subunit 1
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100304252
09122 Translation
03013 Nucleocytoplasmic transport
100304252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100304252
03041 Spliceosome [BR:
zma03041
]
100304252
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100304252
Spliceosome [BR:
zma03041
]
Complex C
Other components
EJC/TREX
100304252
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100304252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
100304252
NCBI-ProteinID:
NP_001159168
UniProt:
C0HE46
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All DBs
Position
1:2950574..2963255
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AA seq
638 aa
AA seq
DB search
MAEPSPPPVSNAGLRILLSKDRPAPSPPPTAAVSSHADRDRIIGVFRSALSRNEPPETFS
LQTVQEAIKPQKETVLVLEENQSLENALRTLLQELVSSAVQSDKKIMQYGNSLDSGESNC
LITRLLDIVLYLCERGHVEGGMVFQLLEDLTEMSTIKDCKDIFGYIESQQDVLGKQELFG
RGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSERSALNIKGVFNTSNVTKYE
KDAMDGISVDFNFYKTLWSLQEHFSNPALTSTNPAKWQKFSSNLAVVLNTFEAQPLSDDD
GKLNNLNEEEDAAFNIKYLTSSKLMGLELKDPSFRRHILVQCLIFFDYLKAPGKNDKEGP
TGSMIEEIKSCEEHVKKLLEIIPPKGKEFLKSIEHILEREKNWVWWKRDGCLAFEKPPFE
KKPGQAGARKRKPRWRLGSKELSQLWKWAEQNPNVLTDPDRVRMPSITEYWKPLAEDMDP
SAGIEEEYHHKSNRVYCWKGLRFSARQDLDGFARFSDYGIEGVVPSELLPPEVNAKFSSK
PAEKVKRTRKEDSKSVSAHQPREHQVAATPETDGGVDPEEGEGAAPMDSDNGAVGDSQKR
SPGEVSGPESGQCEPEADADDNVRTETTSRDARAGEMK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccctcgccgcctccggtgtcgaacgctggcctccgtatcctcctgtcgaag
gaccggccggctccctcccctccacccaccgccgctgtctccagccacgccgaccgcgac
cgcatcatcggagttttcaggagcgcgttgtctaggaacgaacccccggaaacattttcc
cttcagacggttcaggaagcaattaaacctcagaaggaaaccgtgttggttctagaggag
aatcagtccttggaaaatgctcttcgaactttgctgcaggagcttgtgtcatctgcggtc
caatcggataaaaagattatgcagtacgggaattctttggatagcggagaaagtaactgc
ctgataactcgccttcttgatattgtgctttacctttgcgaaagagggcatgttgaaggt
ggtatggtattccagctgttagaagacctaactgaaatgtcaacaatcaaagactgcaaa
gatatctttgggtatattgagagccagcaagatgtattggggaagcaagaactttttgga
cgtggcaaactagttatgctaaggacttgcaaccaacttcttcgcagactatcgaaggca
aatgatgtggtgttctgtgggcgcattattatgtttcttgcacattttttcccattatcg
gagcgttcagctctcaacattaaaggggttttcaatacatcaaatgtaacaaagtacgaa
aaggatgctatggatggaatctctgttgatttcaacttctacaagaccctctggagtcta
caggaacatttcagcaacccagctttgacttctacaaatccggcaaaatggcaaaagttc
tcttctaatctggcggttgtgttgaacacatttgaagctcaacctcttagcgatgatgat
ggaaaacttaacaatctgaacgaggaggaagatgctgctttcaatattaagtacctgact
agcagtaaattaatgggtttggagttgaaggacccaagttttcgacgccacatccttgtt
cagtgtcttatattttttgactatctcaaggcacctgggaaaaatgacaaagaaggtcca
acagggagcatgatagaggaaattaaatcttgtgaagagcatgttaagaagcttctggaa
attattccccccaaagggaaggaatttctgaaaagcattgaacatattcttgagcgggag
aaaaattgggtttggtggaagcgagatgggtgtctcgcatttgaaaagccaccctttgaa
aagaaaccaggtcaggctggtgccagaaaacggaagccaaggtggagactgggaagcaaa
gagctcagccaactttggaaatgggcagaacaaaaccccaatgtcttgactgatcctgac
cgtgtccgcatgccatcaattacagaatattggaaaccacttgcagaagatatggatcca
tctgctggaattgaagaggagtatcaccacaaaagtaatcgggtgtactgttggaaagga
ctacggttttcggccaggcaggacttggatggattcgcgcggttttcagactacgggatc
gaaggggttgtaccttcagaactgctgccacctgaagtaaatgccaagttttcttctaaa
cccgccgagaaggttaagcggacgagaaaggaagattcaaaaagcgtgtcagctcatcag
cccagagagcatcaggttgctgcgacacctgaaaccgacggcggtgtcgacccggaagaa
ggcgaaggcgcggcgccaatggattccgacaacggcgcggtgggggatagccagaaacgg
agcccgggggaggtctctggccctgaaagcgggcagtgcgagcctgaggcggacgctgat
gataacgtgaggacggaaactaccagtagggatgctcgtgccggagagatgaaatga
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