Zea mays (maize): 100383373
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Entry
100383373 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100383373
KO
K07466
replication factor A1
Organism
zma
Zea mays (maize)
Pathway
zma03030
DNA replication
zma03420
Nucleotide excision repair
zma03430
Mismatch repair
zma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100383373
03420 Nucleotide excision repair
100383373
03430 Mismatch repair
100383373
03440 Homologous recombination
100383373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zma03000
]
100383373
03032 DNA replication proteins [BR:
zma03032
]
100383373
03400 DNA repair and recombination proteins [BR:
zma03400
]
100383373
Transcription factors [BR:
zma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100383373
DNA replication proteins [BR:
zma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100383373
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100383373
MMR (mismatch excision repair)
100383373
DSBR (double strand breaks repair)
HR (homologous recombination)
100383373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
TMEM219
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
100383373
NCBI-ProteinID:
NP_001169500
UniProt:
C0PFF9
LinkDB
All DBs
Position
4:182187830..182191450
Genome browser
AA seq
656 aa
AA seq
DB search
MAAAKLTGNAVAAAMAGDTNLKPVVQVVDLRSIAVTGAPGSGPRFRAIISDGVATGHALF
ASQLCDLARSGVVRRGSVVQLLDYIVNNVGPTRNRKAIVILNMEVLVAECEIIGNPALPP
ESGDSSSNSLRADQFNGAPPNGSMAGSTLNKVIKPSDNAPVIQRSMTGNSLNMVPRPSDN
AQVFQPTVQPSYRPAPKYRSHGTIMKNDAPARIIPIPALNPYQGRWAIKARVTAKGEIRR
YHNAKGDGKVFSFDLLDTDGGEIRATCFNALVDRFYEVVEVGKVYVVSRGNLKPAKKDYN
HLNNEWEIFLEPQSTIELCLDENSSIPAQRFSFSSIDKIENSENNAIVDVIGVVTSVNPS
TTIQRKNGMEAQKRTITLNDMSGRSVELTMWGDFCNREGSQLQEMVECGAFPVLAVKAGK
VNDYSGKSVGTISSSQLHINPDLAEAHSLRQWFDCGGRDASTQSISRDFTPSASWNEVRK
TVAQIKDDGLGMGDKPDWVTVKAAISFIKTDSFCYTACPNVIGDRQCGKKVTKSDSGNWL
CDKCNQEFPECDYRYLLQLNIQDHTGTTSVTAFQDRGQEILGCSARELNIFKENKDPRYT
DVLINCLYQNYLFRLKVKEEQYGDVRQVKNTVAKVERVDPLAESKFLLDSISRFIP
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgaagctgacaggcaacgccgtggcggcggcgatggcgggggacaccaac
ctcaagccggtggtgcaggtcgtcgacctccggagcatcgcggtcaccggggccccgggc
tccgggcccaggttccgcgccatcatctccgatggcgtcgccacggggcacgcgctcttc
gcctcgcagctctgcgacctcgcgcgctccggcgtcgtccgccgcggctcggtcgtgcag
ctcctcgactacatcgttaacaacgtcggccccacccggaacagaaaggcaattgttatt
ctgaacatggaggttcttgttgcagagtgtgagattattggaaatccagcactacctcct
gaatctggagattctagttcaaattccctgagagcagaccagtttaatggagcacctcca
aatggttcaatggcagggagtactttgaacaaagtgataaagccctctgacaatgctcca
gtaatccagagatcgatgacaggtaactctttgaacatggttcctaggccaagtgacaat
gcacaggtcttccaaccaaccgtacagccatcctatcgtcctgcacccaaatacagaagc
catggcacaatcatgaaaaacgatgctcctgctagaataatccccatacctgctctaaat
ccttatcagggccgctgggctatcaaggctcgagtaactgccaaaggagagatccgccgg
taccataatgcaaaaggtgatggcaaagtgttctcttttgacctgcttgatactgatggt
ggtgagattcgggctacatgtttcaatgctcttgttgatcgcttctatgaagttgtggaa
gttggtaaggtctatgtggtatctagaggaaacttgaaacccgcaaagaaggactacaac
catctgaataatgagtgggagattttcttggaacctcagtcaactattgaactttgtctt
gatgagaacagctctattcctgcccagcggtttagcttctcatcgattgataaaattgaa
aattcagagaacaatgcaattgttgatgtcattggtgttgttacatctgtcaaccctagt
actacaatacagaggaaaaatggtatggaagctcagaaaaggaccatcaccctgaatgat
atgtctggtcgaagtgttgagcttaccatgtggggtgacttctgcaacagagaaggctcg
cagctgcaagaaatggttgaatgtggggcgtttcctgtgctcgctgtcaaagctggaaaa
gtcaatgattacagtgggaagtctgttggcacaatttcttcatctcaactccacataaac
cctgatcttgctgaggctcattctctcaggcagtggtttgattgtggaggaagagatgct
tctactcagtctatatccagggattttactccttcagcatcatggaatgaggtccgaaag
acagtagcacagataaaggatgatggtcttggaatgggggacaaacccgattgggtcacg
gtgaaggctgctatttcgttcatcaaaaccgattccttctgctacacagcttgccccaat
gtgattggagacaggcaatgtggtaaaaaggtgacaaagtctgattcaggcaactggcta
tgtgacaagtgcaatcaagagtttccagagtgtgattacaggtatctcctacagttgaac
attcaagaccacacgggaacaacttctgtgacagcatttcaagatcgtggacaggagata
cttggttgctcagctcgagagctcaacatttttaaagagaacaaagatcctcgctacaca
gatgtcttgatcaattgcttgtatcagaactatttgttcaggctaaaagtgaaagaagaa
caatatggcgatgtacgacaagtgaaaaacactgtggccaaggtggagagggtggatcct
ttggctgagagtaaatttctgcttgattccatttcaaggtttataccatga
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