KEGG   Zea mays (maize): 103654921
Entry
103654921         CDS       T01088                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
zma  Zea mays (maize)
Pathway
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103654921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zma03041]
    103654921
   03036 Chromosome and associated proteins [BR:zma03036]
    103654921
Spliceosome [BR:zma03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103654921
 Complex B
    103654921
 Complex C
   U2 SnRNP specific factors
    103654921
Chromosome and associated proteins [BR:zma03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    103654921
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT Cnd1 Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME IFRD
Other DBs
NCBI-GeneID: 103654921
NCBI-ProteinID: XP_035823456
LinkDB
Position
4:complement(246283977..246290073)
AA seq 1280 aa
MDSIDADLARTQEERRKMEEALAAGAPMAVSSVTFDTDLYGGGGADPNRFAGYDTSIPAS
EDDAAEDDTELANPAPRRLAAYTGHAIAAADLPRSADDDDGLPKRSQRIIDREDDYRRRR
LNQIISPERHDPFAAGEATPDPSVRTYADVMRDAALQKKKEDLLREIAKKKKEEEEKEKE
RKAAAPEQPAAATKRRNRWDQSQDGDAAAGGKKAKTSSDWDAPDATPGIGRWDATPGRVG
DATPSVRRNRWDETPTPGRMADADATPAAGGATPGATPSGAWDATPKLPGGVTPTPGKKQ
RSRWDETPASMGSATPGGLGAATPVGYTPGPTPFGAENLATPTPSQIARGPITPEQYQLM
RWERDIEERNRPLTDEELDAMFPQEGYKILEPPASYQPIRTPARKLLATPTPLGTPLYAI
PEENRGQHFDVPKELPGGLPLMKPEDYQYFGTLLNEEEEEELSPEEQKERKIMKLLLKVK
NGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVLYKLDE
LVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVR
NTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLKS
LVEIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDTVLKPLWKGIRSHRGKVLAA
FLKAIGFIIPLMDALYASYYTKEVMQVLIREFQSPDEEMKKIVLKVVKQCVSTEGVEADY
IRNDILPDFFKHFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYR
RMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQR
VKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGE
EYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIAD
RGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQ
ERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKD
YIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSP
HVINAVMEAIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDSLVASY
PALEDDGDNIFSRPELAMFV
NT seq 3843 nt   +upstreamnt  +downstreamnt
atggactcgatcgacgcggatctagcgcgcacgcaggaggagcggcgcaagatggaggag
gcgctggcggccggcgcgcccatggccgtgtcctccgtcaccttcgacaccgacctctac
ggtggcgggggcgccgaccccaaccgcttcgcgggctacgacacctccatcccggcctcc
gaggatgacgccgcggaggacgacacggagttggccaaccccgcaccgcgccgcctcgcg
gcctacacgggccacgccatcgccgccgccgacctcccgcggtcagccgacgacgacgac
gggctgcccaagaggtcccagcgcatcatcgaccgcgaggacgactaccgccgccgccgc
ctcaaccagatcatctcgccggagcgccatgacccgttcgctgccggggaggccaccccg
gatccctctgtgcggacctacgccgacgtcatgcgcgacgcggcgctgcagaagaagaag
gaggacctgctcagggagattgccaagaagaagaaggaagaggaggagaaggagaaggag
aggaaggctgccgcgcctgagcagccggctgctgcgacgaagcggcgtaacaggtgggat
cagtcgcaggatggcgatgctgctgccggtggcaagaaggcaaagacatcctcggactgg
gatgcccccgatgcgactcctgggattgggcgttgggatgccacccctggacgtgttgga
gacgccacaccctccgtgagaaggaacagatgggatgagacaccgactccaggtaggatg
gctgatgctgatgcgacgcctgcagctggcggtgccacccctggggcaactccttctggg
gcttgggatgcgactccaaagcttcctggtggtgtcacgccaacacctggtaagaagcag
aggtcaaggtgggatgagacgccagcgagtatggggagtgcaacccctggtggtcttggt
gctgcaacacctgttggttatactcctggtccaacgccatttggtgcagagaaccttgcc
acaccaactcctagccagattgcccgtggaccgattactccggagcagtaccagctcatg
cggtgggagcgggacattgaggagaggaacaggcctctcactgatgaggagctcgatgcc
atgttcccgcaggaaggatacaagattcttgagcccccggcttcctaccagcccatcagg
accccagcaaggaagctccttgcgacaccaacacctctggggacaccactttatgctatt
ccagaggagaatcgtgggcagcattttgatgtgcctaaggagctgcctggtggattgcct
ctcatgaagccagaggattaccaatactttggaactttgctgaatgaagaagaggaggag
gagctatcgccagaggagcagaaggagaggaaaatcatgaaactgttactcaaagtgaag
aatggtacacctccacagcgtaaaacagcacttcggcaattgacagacaaagcccgggag
ttcggtgctggaccactgttcaacaaaatcctgcccttactcatgcagccaacactggag
gaccaggagaggcatcttctggtgaaggtcattgatagggtactgtataagctggatgag
ctggtccgaccttttgtgcacaagattcttgtggttattgaaccactgttgattgatgag
gactactatgctcgtgttgaaggcagggagatcatctcaaatcttagtaaagcagctggg
cttgctactatgattgctgccatgcgaccggatattgataacattgatgagtatgtgaga
aacaccactgctagggcattcagtgtagtggcttctgctttgggcatccctgccctttta
ccattcctgaaggctgtctgtcagagtaagaagtcttggcaagctaggcacactggtatc
aaaatcgtgcagcagattgctattctcatgggttgtgctgttttgccacatctcaagtca
ttagtcgagatcattgagcatggtctgagcgatgaaaaccagaaagtccggacaattact
gccctttctcttgctgcacttgctgaggctgctgcaccatatggtatagaaagttttgat
accgtattgaagcctttgtggaagggtatcagatctcaccgagggaaagtccttgctgcc
ttcctcaaggccattggtttcatcatccctcttatggatgctctgtatgctagttactac
acaaaggaggtgatgcaggtcctcattagggagttccaatctccagatgaagaaatgaag
aagattgttctcaaggttgtgaaacagtgtgtcagtacagagggtgtggaggctgattat
atccgaaatgacatccttccagatttcttcaagcacttctgggtgaggagaatggctcta
gatcggaggaactataagcagcttgtggaaactacagtggagatagcaaacaaggttgga
gttgctgatattgtggggaggattgttgaggatctgaaagatgagagcgagccttacaga
agaatggtgatggaaacaattgagaaggtagtggccaacttgggtgcttcagatatcgat
gctcgtcttgaggagctgcttattgatggtatcttgtatgctttccaagagcagactagt
gatgatgcaaatgttatgcttaatggttttggagctgtggttaatgcacttggacaaaga
gttaagccttaccttcctcagatttgtggtaccatcaagtggcgattgaacaataagagt
gcaaaagttaggcagcaagctgctgatctgatctccaggatagccattgtcatgaagcag
tgccaggaggagcaactcatgggtcacttgggtgttgtgctgtatgagtacttaggagaa
gagtatcctgaggtgttgggttcaattcttggagccttgaaggctatcgtcaatgtcatc
ggtatgactaaaatgactcctccaatcaaggatcttcttcctcgtctaacccccatcttg
aagaacaggcatgagaaggtccaagagaactgcattgatcttgttggtaggattgctgat
cgtggagcagaatttgtgccagcaagggaatggatgaggatttgttttgagctgctcgag
atgttgaaggctcataagaaaggtattaggagagccactgtgaatacatttggttatatt
gcaaaggctatagggccacaggatgtgctggccaccctgttgaataatttgaaggtgcag
gagcggcagaaccgtgtctgcacaactgtagcaattgccatagttgctgaaacttgctca
cctttcacagttttacctgcccttatgaatgagtaccgggtcccagagctcaatgtccaa
aatggtgttctgaagtcactctctttcctctttgagtatattggtgagatgggtaaagat
tacatatatgctgtcactcccttacttgaagatgctttaatggatagagatctggttcac
cggcagactgctgcatctgctgttaagcacatggctctaggtgttgctggcttgggttgt
gaggatgctcttgttcatctgcttaactatgtttggcccaacatatttgagacatctccc
cacgttataaatgctgtcatggaggcaattgagggtatgagggttgcgctaggtgcagct
gtgattttgaattattgcctgcaaggtctcttccatccagcaaggaaagtacgtgaagtt
tattggaagatatacaactctctgtacattggtgcacaggattcacttgttgcttcttat
cctgccctggaagacgatggggataacatatttagtcgcccagagttggcaatgttcgtc
tga

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