Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_0778
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Entry
ZCP4_0778 CDS
T02932
Name
(GenBank) 23S RNA-specific pseudouridylate synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
zmi
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Brite
KEGG Orthology (KO) [BR:
zmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zmi03009
]
ZCP4_0778
03016 Transfer RNA biogenesis [BR:
zmi03016
]
ZCP4_0778
Enzymes [BR:
zmi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
ZCP4_0778
5.4.99.29 23S rRNA pseudouridine746 synthase
ZCP4_0778
Ribosome biogenesis [BR:
zmi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ZCP4_0778
Transfer RNA biogenesis [BR:
zmi03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
ZCP4_0778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHB10083
LinkDB
All DBs
Position
complement(864189..864848)
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AA seq
219 aa
AA seq
DB search
MPILAKRVLFIDAEAMIIDKPAGLPVTSVRDGSLSLENYLASLCFGFKRWPSIVHRLDRD
TSGCLLLARNPKMHRRLSEAFSQGQVKKCYWAILEGVPEKNEGIIDLPLLKISSPKSGWR
IVADDKGKRAVTHWEILAKNKGRSLVAFRPETGRTHQLRVHAATGLGLPIVGDPFYGSHK
DENISRMMLHAHSLEIARLEKKPIAAEAPLPKAFTDLGF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcctatacttgcaaaacgtgttctttttattgatgctgaagccatgattatcgacaaa
cctgccggtttgccggtgacttcggttcgtgatggttctctcagccttgagaattatctg
gcttcattatgcttcggcttcaaacgttggccaagtattgttcatcgtttggatcgcgac
acgtcaggatgcttattgctggcgcgtaatcctaaaatgcaccgtcgtttaagcgaagcc
tttagccaaggtcaggtgaaaaaatgctattgggccattctagaaggcgtgccggagaaa
aatgaaggcattatagacttgcctttgttgaagatatcttcgcctaaaagtggctggcgg
atcgtcgcagatgataaaggcaaaagagccgttacccattgggaaatcttggccaaaaat
aaagggcgcagcttggtagcctttcgtcctgaaaccggaaggactcatcagttaagagtg
catgccgcaacagggttaggcttacctattgtcggtgacccgttttatggcagtcataaa
gacgaaaatatttcgcgaatgatgcttcatgcgcattccttggaaattgcccgtctggag
aaaaagccaattgccgcggaagcccctttacctaaggcatttacagatttagggttttag
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